Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00993 AAAATAGGACAAAAGATGGCTGAATCTCTTGGAGTAGTAGAAGGTGCTGATTTCGAGGAGTGGCTATACGAGTTTAGATTTAACAAATATAACTTCACCCCAGAAACAGTAGGGTCCCCAGGAGTTCAAATACACACGGATTCAAGCTTCCTAACTGTTCTCAAAGATGATGACAATGTTGGTGGTCTTGAAGTGATGGACTCTTCTGCCTCCTTTCTGCCAATACCTCCTTTCCCTGGGACCTTTCTTGTCAATCTTGGAGACATTGCTCGTGTGTGGAGCAATGGAATGTTTTGCAATTTGACACACCGTGTGCAATGCAAGGAAGGGAACGAGCGTCTTTCAATTGCCACTTTAATGTTAGCACCCAAGAACAGGAATGTTGAGGCCCCTGAGGAATTGGTGGATCATCGTCACCCTCGTCTGTATCAACCTTTTGTTTATGAAGATTATAGGAATATCAAAGTTAGCAAGAAGATTCCCACCAAGGAAGGCCTAGAGTTGTTCCGCTTGACCAAGTCATTGGAACTAGGGCTTAGAAATTAA 546 0.4341 KIGQKMAESLGVVEGADFEEWLYEFRFNKYNFTPETVGSPGVQIHTDSSFLTVLKDDDNVGGLEVMDSSASFLPIPPFPGTFLVNLGDIARVWSNGMFCNLTHRVQCKEGNERLSIATLMLAPKNRNVEAPEELVDHRHPRLYQPFVYEDYRNIKVSKKIPTKEGLELFRLTKSLELGLRN* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00993 181 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 17 123 IPR005123 -
Lapu2g00993 181 Gene3D - 1 174 IPR027443 -
Lapu2g00993 181 Pfam 2OG-Fe(II) oxygenase superfamily 28 118 IPR044861 -
Lapu2g00993 181 SUPERFAMILY Clavaminate synthase-like 5 170 - -
Lapu2g00993 181 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00993 Lapu-Chr2 9260311 9261269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00993 41 171 Glycosyltransferase AT5G59530 32.090 8.89e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00993 K23947 - gmx:100783059 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00993 2 9260311 9261269 Lapu2g00993 2 9260311 9261269 ECH