Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00943 ATGCTCGCGGAACAGCCTGTTCTGTTCAGGAGGAGCCCTTCGCGGAGGCGCTTGAGACCCGGGTTTGATACCGATGATAGGGGTTGGACCTCGCTTCATGTTTTCGCTAGGAAAGGCGATCTCAAATTGGTTGAAAAACTTCTCGATGAAGGAATGAATGTCAATGTGTCTGCATGGGGCCCTAAATCAAAAGGGGTGACCCCTCTCCACCTTGCTGCGGAAGGTGGTCACATTGGAGTGATGGATGTATTACTTGAACGTGGTGCTGACATTGATGCCAGAACCAAGGGTGCTTGTGGCTGGACACCGCTCCACATTGCAGCCAAAGAAAGGAGGAGGGATGCTGTGAAATTCTTGATAGAGAATGGAGCCTTTTTGCCACCTGATATCAATGATAGCAGATTTAACCCTCCGCTTCATTACTGTCCAGGACTAGAATGGGCCTATGAGGAGATGAAACTACATCGACAGCTAGACTTATCTGCTGGAGAGACATCTTACAGCTCTGAAAGTTAA 516 0.4884 MLAEQPVLFRRSPSRRRLRPGFDTDDRGWTSLHVFARKGDLKLVEKLLDEGMNVNVSAWGPKSKGVTPLHLAAEGGHIGVMDVLLERGADIDARTKGACGWTPLHIAAKERRRDAVKFLIENGAFLPPDINDSRFNPPLHYCPGLEWAYEEMKLHRQLDLSAGETSYSSES* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00943 171 Gene3D - 20 161 IPR036770 -
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat profile. 99 124 IPR002110 GO:0005515
Lapu2g00943 171 PRINTS Ankyrin repeat signature 28 43 IPR002110 GO:0005515
Lapu2g00943 171 PRINTS Ankyrin repeat signature 80 94 IPR002110 GO:0005515
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat region circular profile. 99 124 - -
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat region circular profile. 64 96 - -
Lapu2g00943 171 Pfam Ankyrin repeat 28 56 IPR002110 GO:0005515
Lapu2g00943 171 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 24 147 - -
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat profile. 27 59 IPR002110 GO:0005515
Lapu2g00943 171 SUPERFAMILY Ankyrin repeat 24 142 IPR036770 -
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat region circular profile. 27 56 - -
Lapu2g00943 171 ProSiteProfiles Ankyrin repeat profile. 64 96 IPR002110 GO:0005515
Lapu2g00943 171 SMART ANK_2a 27 56 IPR002110 GO:0005515
Lapu2g00943 171 SMART ANK_2a 64 93 IPR002110 GO:0005515
Lapu2g00943 171 SMART ANK_2a 99 132 IPR002110 GO:0005515
Lapu2g00943 171 Pfam Ankyrin repeats (many copies) 67 120 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00943 31 149 Acyl Lipid Metabolism Gene Families AT5G53470 33.613 1.04e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00943 - - gmx:100818162 318.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00943 2 8758052 8761218 Lapu2g00943 2 8758052 8761218 ECH