Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00935 ATGGCTTCTGCATCAGGATGTGCACCATTTGAATTTTCTAGCAAGTACTATCATGTGTCTGAGAATGGAGGTGTGTGCGTGAGGCAGACCAGTTTCTTTGAAGGCAAACCAGTGCTTAATCAGGGAGTTGGTTACTCTGTCATTCTTGGTTTTGGTGCTTTCTTTGCTGTCTTCACATCTTTCTTGGTGTGGCTGGAGAAGCGTTATGTTGGGTCACGTCACACGTCTGAATGGTTCAATACAGCAGGCAGAAGTGTTAAGACAGGCCTTATTGCTAGTGTTATTGTGTCTCAGTGGACATGGGCTGCTACAATATTGCAAAGCTCTAATGTTGCATGGGAATATGGAGTCAGTGGACCTTTCTGGTATGCTAGTGGGGCCACCATCCAGGTATTGTTGTTTGGAATCATGGCCATAGAGATTAAAAGGAAGGCTCCTCGTGCTCACACTGTGTGTGAAATTGTCAAGGCCCGTTGGGGAACTACTGCACACGTTGTATTCCTCTTTTTCTGCTTCTTGACGAACATAATTGTGACAGCTATGTTGCTCCTTGGTGGTTCTGCGGTTGTGAATGCATTAACTGGAGTGAACCTTTATGCCGCTAGCTTTCTAATACCACTTGGAGTAATTGTCTATACACTAGCGGGTGGACTGAAGGCAACATTCTTAGCAAGCTATATCCATTCTGTCATAGTGCACATTGTTTTGGTGATTTTTGTCTACCTTGTCTACACGGCTAGCAGTGAGCTTGGTAGCCCTTCTGTTGTGTACAATCGCCTCCTAATGGTTGCAAGCAAATCTAGAACATGTCAGGATCCTATATCACACCAAGGGCAATCTTGTGGTCCTGTCGGTGGGAATCACCAAGGTTCTTACCTGACAATGCTGAGTTCAGGTGGCTTAGTGTTCGGGATTATAAACATTGTTGGCAACTTTGGCACTGTGTTTGTTGACAATGGATACTGGGTGAGTGCCATCGCAGCAAGACCTTCATCAACTCATAAAGGCTACTTGTTGGGAGGCTTGGTCTGGTTTGCTGTGCCATTTTCTTTGGCTACATCGCTGGGTCTAGGAGCCCTAGCCCTTGATTTACCAATAAATGAAAGTGAAGCAGGTCGTGGACTTGTTCCCCCTGCTACAGCAGTAGCTTTGATGGGGCAAGGAGGATCTATTCTTCTTCTTACCATGCTTTTTATGGCAGTGACTTCTGCTGGTTCATCAGAACTAATTGCGGTGTCATCATTATGCACATATGATATCTACCGAACTTACATAAATCCTAATGCAAGTGGAAAGCAAATCCTGAAGGTGTCAAGGGGAGTTGTCCTAGGCTTCGGGTGTTTCATGGGGTTGTTAGCAGTCATACTGAACAAGGCTGGAGTTTCTTTAGGATGGATGTACCTTGCAATGGGAGTTCTGATTGGCTCAGCAGTTCTTCCTATTGCTTTTATGCTTCTATGGAGAAAAGCAAATGCAATTGGAGCCATTCTTGGAACACTCACAGGTTGTGTTTTAGGAATCATCACATGGCTGTCTGTAACAAAAATACAATATGGCCGGGTAAACCTTGATACAACTGGAAGAAATGCACCAATGCTGGTTGGAAACCTTGTCTCTATACTAACTGGAGGAGTTGTTCATGCTATCTGCAGCATGTTATGTCCTCAGAACTATGACTGGAGTACCACCAAGCAAATCACAGTGGTTGAAAAGGAAAAGACTGATCTGCCTGCTGAAGAGTTTAAAGAAGAAAAGCTAAGCAGAGCTAAAGCTTGGGTGGTGAAGTGGGGTATTGGTTTCACTGTTTTGATAGTCATACTTTGGCCTATTCTCTCCCTAGCAGCAGGTGAGTTCAGTAAGGGCTACTTCTATTTCTGGGCAGTGATTGCCATAGCATGGGGTACAGTTGGGTCTGCTGTGATAATTGTTTTACCACTATTGGAGAGCTGGGAAACCATCCAGACTGTGATTATGGGCATGTTTACAAATGACAGACTAATGGAAAAGGTTGAGGAGTTAAATTTCAAGTTGCAGACAATCATGCAAGCAATACCAGAAGCAGAGAGACTTTACTTTCTTGAGAAGGGAAAGGCCAAAAAGTTAGAAGTCTCAGAACAAGAGCCTTCTTCTCTTCCAGCATAA 2142 0.4421 MASASGCAPFEFSSKYYHVSENGGVCVRQTSFFEGKPVLNQGVGYSVILGFGAFFAVFTSFLVWLEKRYVGSRHTSEWFNTAGRSVKTGLIASVIVSQWTWAATILQSSNVAWEYGVSGPFWYASGATIQVLLFGIMAIEIKRKAPRAHTVCEIVKARWGTTAHVVFLFFCFLTNIIVTAMLLLGGSAVVNALTGVNLYAASFLIPLGVIVYTLAGGLKATFLASYIHSVIVHIVLVIFVYLVYTASSELGSPSVVYNRLLMVASKSRTCQDPISHQGQSCGPVGGNHQGSYLTMLSSGGLVFGIINIVGNFGTVFVDNGYWVSAIAARPSSTHKGYLLGGLVWFAVPFSLATSLGLGALALDLPINESEAGRGLVPPATAVALMGQGGSILLLTMLFMAVTSAGSSELIAVSSLCTYDIYRTYINPNASGKQILKVSRGVVLGFGCFMGLLAVILNKAGVSLGWMYLAMGVLIGSAVLPIAFMLLWRKANAIGAILGTLTGCVLGIITWLSVTKIQYGRVNLDTTGRNAPMLVGNLVSILTGGVVHAICSMLCPQNYDWSTTKQITVVEKEKTDLPAEEFKEEKLSRAKAWVVKWGIGFTVLIVILWPILSLAAGEFSKGYFYFWAVIAIAWGTVGSAVIIVLPLLESWETIQTVIMGMFTNDRLMEKVEELNFKLQTIMQAIPEAERLYFLEKGKAKKLEVSEQEPSSLPA* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00935 713 Pfam Sodium:solute symporter family 80 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lapu2g00935 713 Gene3D Sodium/glucose cotransporter 68 611 IPR038377 -
Lapu2g00935 713 CDD SLC5sbd_DUR3 45 553 - -
Lapu2g00935 713 NCBIfam sodium/solute symporter 79 502 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lapu2g00935 713 ProSiteProfiles Sodium:solute symporter family profile. 44 516 IPR001734 GO:0016020|GO:0022857|GO:0055085
Lapu2g00935 713 Coils Coil 663 683 - -
Lapu2g00935 713 FunFam Urea active transporter 67 577 - -
Lapu2g00935 713 PANTHER - 15 697 IPR031155 GO:0015204|GO:0016020|GO:0071918
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00935 7 700 Organic Solute Cotransporters AT5G45380 78.398 0.0 1107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00935 K20989 - gmx:100784391 1310.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00935 2 8670337 8673602 Lapu2g00935 2 8670337 8673602 ECH