Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00927 ATGAAATTAAGGATTGCGGCTTCTAATAGACAACAAGCTTTCGTTGAAATGGGGGAGTTCACCCGGGACGAGTATGTGGCTGTCATTGACTTACCTTCCACAAGGGAAAATCACTCAAGGAAAGTTTCACTTCTTCCTCTAGTGTTTCTCATCTTCTATGAGGTTTCAGGGGGACCTTTTGGGGTGGAGGATACTGTGCAGGCAGCTGGTCCTCTGTTAGCCCTCCTTGGATTCTTGATTTTCCCATTAATATGGAGTGTTCCTGAAGCTTTGATAACTGCTGAGATGGGTACCATGTTCCCTGAAAACAGTGGTTATGTGGTTTGGGTTTCGTCTGCTCTGGGTCCATTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTGAGTGGGGTGATAGACAATGCTTTATACCCAGTTCTATTTCTTGACTATCTGAAGTCAGCAGTCCCAGCTTTAGGTGGTGGTTGGCCTAGAGTTACTGCAACATGGGGTCTGACTATTGTGCTCACTTACTTGAACTATAGGGGTATGGTCATTGTGGGATGGGTTGCTGTTTGTTTAGGGATTTTCTCACTCCTTCCTTTTGTGGTTATGGGGTTCTTGGCAATTCCCGATCTAGAGCCTTCAAGATGGACTGTGACAGATCTCAAAGATGTTAACTGGAATTTGTATCTGAATACTCTATTTTGGAATCTTAACTATTGGGACTCCATAAGTACTCTTTCGGGAGAAGTGGAAAATCCAAAGAAAACTCTTCCAAGGGCTTTGTTTTACGCTGTGATCCTAGTAGTTCTAGGGTACTTCTTTCCTCTTCTAATAGGTACCGGTGCTGTTCCCCTTAACCGGGATCTGTGGTCGGATGGATACTTCTCAGATATTGCTATGATTATAGGAGGAGCATGGTTGAGATGGTGGCTTCAGGCTGCTGCCGCGATGTCAAATATGGGAATGTTTGTTGCTGAAATGAGTAGTGATTCTTTCCAGCTACTAGGGATGGCCGAGAGGGGAATGTTGCCTGAGCTCTTCAACAAGAGGTCTCGCCACGGAACACCTCTCATAGGAATACTCTTTTCAGCATCTGGTGTGATTTTACTGTCATGGATGAGCTTTCAAGAAATTGTAGCTGCAGAGAATTTCTTGTACTGTTTTGGAATGATTTTGGAGTTTATTGCATTCATTCTGTTAAGGATCAAACACCCCAATGCATCTCGCCCTTACAAGATAGCAGGCGGAACAGCTGGAGCAATTTTAATCTGTATCCCTCCCACAATATTGATTTGTGTTGTGTTGTTTTTCTCCTCCCTCAAAGTAATGTTCATAAGCCTCATTGCTATAGCAATTGGCCTTGTGTTGCAGCCTTGCCTCAAATACGTGGAGAAAAAGAGATGGATGAAGTTTTCCCATAGTTCTGAGCTCCCTGATTTTGGCAATCAGGAGGACACTCGCACTCTGGTGTATTAA 1461 0.4408 MKLRIAASNRQQAFVEMGEFTRDEYVAVIDLPSTRENHSRKVSLLPLVFLIFYEVSGGPFGVEDTVQAAGPLLALLGFLIFPLIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKSAVPALGGGWPRVTATWGLTIVLTYLNYRGMVIVGWVAVCLGIFSLLPFVVMGFLAIPDLEPSRWTVTDLKDVNWNLYLNTLFWNLNYWDSISTLSGEVENPKKTLPRALFYAVILVVLGYFFPLLIGTGAVPLNRDLWSDGYFSDIAMIIGGAWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPELFNKRSRHGTPLIGILFSASGVILLSWMSFQEIVAAENFLYCFGMILEFIAFILLRIKHPNASRPYKIAGGTAGAILICIPPTILICVVLFFSSLKVMFISLIAIAIGLVLQPCLKYVEKKRWMKFSHSSELPDFGNQEDTRTLVY* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00927 486 PIRSF AA_transporter 30 481 - -
Lapu2g00927 486 Pfam Amino acid permease 47 434 IPR002293 GO:0016020|GO:0022857|GO:0055085
Lapu2g00927 486 PANTHER POLYAMINE TRANSPORTER PUT1 34 478 IPR044566 GO:0022857
Lapu2g00927 486 FunFam Amino acid permease, putative 38 467 - -
Lapu2g00927 486 Gene3D Amino acid/polyamine transporter I 36 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00927 Lapu-Chr2 8570064 8572899 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00927 32 482 Organic Solute Cotransporters AT1G31830 75.610 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00927 - - gmx:100816567 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00927 2 8570064 8572899 Lapu2g00927 2 8570064 8572899 ECH