Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00924 ATGGGTAATCCACGGAAATCGAGGACCGCCGGCGACCTTCATACGGCGGCAAGGTCCGGGGATCTCATCGCCGTTCAGACAATTTTGTCTTCAAATCCTTTGGCCGTTAATTCCAGAGATAAGCATTCCAGAACACCTCTACATTTAGCAGCATTTTCTGGGCAAGCAGAGGTAGTCACTTATCTCTGCAAGCACAAGGCTGATGCTGGTGCTTCTGCTATGGATGACATGGCTGCGATACACTTTGCTTCACAGAAGGGGCATTTAGAAGTTATTCGAGTTCTACTTTCGGCTGGGGCTTCTCTCAAAGCATCTACCCGCAAAGGCATGACTGCATTACACTATGCTGTTCAAGGTTCCCATCTGGAACTCGTCAAGTATTTGGCCAAGAAAGGGGCAAACCTTGGTGCCCAGACAAAGGCAGGAAAGACGCCTTTGGATATTGCTAGCAATGAAGAAATCCGATCCTTCCTGGAGGAATTTGAGAAGTCGGCAAAGAGTGGAGAATTGGGAAAGAAAGATAAAGATAAAGCCGAAGAATTCGATCCCAAGACATCTGAATTGGGATCAGAAGGTGATTTGAATGCCGAACCTCCTGCAGCTGTTGTTGATGAAGAAAACAGTGCTAGAGAAAAGAGAAAGGGTAATGAAGATGACGCAATAGTAGAGTCGTCACAACCAAAAAAAGCGAGAGTTAAGTTAAGCCATCTCCAAAGTTCAGATGATACCCAAGAAGAAGAGAACATTTAG 750 0.4573 MGNPRKSRTAGDLHTAARSGDLIAVQTILSSNPLAVNSRDKHSRTPLHLAAFSGQAEVVTYLCKHKADAGASAMDDMAAIHFASQKGHLEVIRVLLSAGASLKASTRKGMTALHYAVQGSHLELVKYLAKKGANLGAQTKAGKTPLDIASNEEIRSFLEEFEKSAKSGELGKKDKDKAEEFDPKTSELGSEGDLNAEPPAAVVDEENSAREKRKGNEDDAIVESSQPKKARVKLSHLQSSDDTQEEENI* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00924 249 Gene3D - 7 182 IPR036770 -
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat profile. 108 140 IPR002110 GO:0005515
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat region circular profile. 42 68 - -
Lapu2g00924 249 PANTHER ANKYRIN REPEAT PROTEIN 6 237 - -
Lapu2g00924 249 Pfam Ankyrin repeats (3 copies) 80 158 IPR002110 GO:0005515
Lapu2g00924 249 Pfam Ankyrin repeats (3 copies) 13 70 IPR002110 GO:0005515
Lapu2g00924 249 PRINTS Ankyrin repeat signature 91 105 IPR002110 GO:0005515
Lapu2g00924 249 PRINTS Ankyrin repeat signature 43 58 IPR002110 GO:0005515
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat profile. 75 107 IPR002110 GO:0005515
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat region circular profile. 75 104 - -
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat region circular profile. 108 135 - -
Lapu2g00924 249 MobiDBLite consensus disorder prediction 165 187 - -
Lapu2g00924 249 SUPERFAMILY Ankyrin repeat 13 156 IPR036770 -
Lapu2g00924 249 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
Lapu2g00924 249 MobiDBLite consensus disorder prediction 165 249 - -
Lapu2g00924 249 SMART ANK_2a 42 71 IPR002110 GO:0005515
Lapu2g00924 249 SMART ANK_2a 75 104 IPR002110 GO:0005515
Lapu2g00924 249 SMART ANK_2a 8 38 IPR002110 GO:0005515
Lapu2g00924 249 SMART ANK_2a 108 137 IPR002110 GO:0005515
Lapu2g00924 249 MobiDBLite consensus disorder prediction 204 243 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00924 6 191 Miscellaneous Gene Families AT1G05640 31.278 1.77e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00924 - - gmx:100812821 408.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00924 2 8550634 8552949 Lapu2g00924 2 8550634 8552949 ECH