Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00896 ATGAATCGCCACCACGACCCCAATCCGTTCGAGGAAGAAGAAGTCAATCCTTTCTCGAAAGGTGCACGGATTCCACCTGTAGCATCTGAACCACTGGGCTATGGTCAAAGACATGATGCTACAGTTGATATTCCTCTGGATACTACAAATGACTCAAAGAAAAAAGGTCAAGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATAAAAAAGAGAGAAGAGGCTGTTGCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCGCTGTTCCCAATCATTCACCATGATATTGCCAATGAGATACCAGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTTTGCCTAGTTTTTAATGTAGTTGCTGTAATTGTCTGTTGGATCAGAGGCGGCGGTGTTAAAATTTTTTTCCTTGCGGTGATATATGCTCTACTTGGTGTTCCACTTTCATATGTTCTTTGGTACAGGCCCCTCTATCGTGCTATGAGGACGGATAGTGCGCTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATCTTTGCTGCAATTGCGCCTCCAATTGTTTTTCATGGAAAATCATTGACGGGCATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATTTTCTATTTGATCGGATTCGGCATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTTCAGAAAATATACATGTATTTCCGGGGGCATAAGTGA 789 0.4271 MNRHHDPNPFEEEEVNPFSKGARIPPVASEPLGYGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKKREEAVARAGVPVDDKNWPPLFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQKIYMYFRGHK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00896 262 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 5 261 IPR007273 GO:0015031|GO:0016020
Lapu2g00896 262 MobiDBLite consensus disorder prediction 1 18 - -
Lapu2g00896 262 MobiDBLite consensus disorder prediction 1 52 - -
Lapu2g00896 262 Pfam SCAMP family 90 260 IPR007273 GO:0015031|GO:0016020
Lapu2g00896 262 Coils Coil 59 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00896 Lapu-Chr2 8281777 8289800 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00896 1 262 Miscellaneous Gene Families AT1G32050 77.273 2.83e-156 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00896 K19995 - gmx:100806586 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00896 2 8281777 8289800 Lapu2g00896 2 8281777 8289800 ECH