Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00889 ATGGCTGCTCTCCAATACTTGGAATCGCTGCGCAATTCGCAACCTGAGCTCGCCGATTGGTACAATTCGCTCGCAGATCTGTATCAGAAGAAGCTCTGGCATCAGCTCACCCTCAAACTCGAGCAGTTTGTTGCACTCGCTGTTTTTCAGGCCGGTGATGCGTTGATTCAATTATATCACAATTTCATCACAGACTTTGAGACTAAAATCAACCTTCTGAAGCTTGCACATTTTGCTGTTATAGTTTCTCGGCAGTATTCTGAAAAAGAAGCTGCTGTTGGTTATCTTGAAGCGGTCATTGAGAAACTGCAAGCCACTAGAGAGCAGCGCATAGAAGAACCTATCCTTTACATTAAGATGCAAATAGCAATATTCAAGCTTGAGCAAGGGAACCAGAGGGAAAGCAAGAAACTACTAGAAGATGGGAAGACTACACTTGACAGCATGACAGATATTGATCCATCTGTATATGCTAACTATTACTGGGTATCATCTCAATATCACAAGACCCGTCAAGAATTTGCGGAGTTCTACAAAAGTGCCCTTCTCTATTTGGCATACACATCAGTGGAGTCTCTATCAGAATCATTCAAGCTGGATTTAGCATTTGATTTGTCCCTCTCTGCCCTTCTTGGGGACAATATCTACAACTTTGGAGAGCTACTTGCCCATCCTATAATCAAGAGCCTTCTAGGGACAAAAGTGGAATGGCTTTACTATATTCTGCAGGCATTCAATTCTGGTGATTTAGTACGATATCAAGAATTGTGTCATGTGCATAATACTGCTTTAAGAGCCCAACCAGCACTGGTTCAAAATGAACAGAAGTTGTTGGAAAAGATCAACATTCTCTGTCTGATGGAGATCATATTCAGTCGGCCTTCAGAAGATCGAACTATTCCCTTGAGTGTAATTGCTGAGCGTACAAAACTTTCTATAGAGAATGTGGAGCATCTCCTAATGAAGAGTTTATCTTCTTGCTTTTTTGTCCTTTCATTACCTCCAGAAGCTGCTTTAGACGTTCATCTAATTGAGGGTATAATTGATCAAGTTGAGGGCACAGTGCACGTTTCCTGGGTGCAACCAAGAGTTCTGGGTATTCAACAGATCAAATCCTTACGGGATCGACTTGACGGTTGGACGGGAAAAGTACACACTGCATTGTTGTCCATCGAGGCAGAAACACCTGATCTGATCGGATCATGA 1206 0.4237 MAALQYLESLRNSQPELADWYNSLADLYQKKLWHQLTLKLEQFVALAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYSEKEAAVGYLEAVIEKLQATREQRIEEPILYIKMQIAIFKLEQGNQRESKKLLEDGKTTLDSMTDIDPSVYANYYWVSSQYHKTRQEFAEFYKSALLYLAYTSVESLSESFKLDLAFDLSLSALLGDNIYNFGELLAHPIIKSLLGTKVEWLYYILQAFNSGDLVRYQELCHVHNTALRAQPALVQNEQKLLEKINILCLMEIIFSRPSEDRTIPLSVIAERTKLSIENVEHLLMKSLSSCFFVLSLPPEAALDVHLIEGIIDQVEGTVHVSWVQPRVLGIQQIKSLRDRLDGWTGKVHTALLSIEAETPDLIGS* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00889 401 ProSiteProfiles PCI domain profile. 174 362 IPR000717 -
Lapu2g00889 401 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 272 380 IPR000717 -
Lapu2g00889 401 FunFam 26S proteasome non-ATPase regulatory subunit 13 homolog B 174 388 - -
Lapu2g00889 401 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 4 399 IPR035298 -
Lapu2g00889 401 Pfam PCI domain 238 327 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00889 Lapu-Chr2 8229959 8234895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00889 K03039 - gmx:100804455 706.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00889 2 8229959 8234895 Lapu2g00889 2 8229959 8234895 ECH