Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00867 ATGGCTTCTAAATTCAAGCATGGATCCTCTATGGTTCGGAAGATCACGCAGCTGAGCAATGATTTGGATCAGGAGGGCGAGAATGGAAGTGTTGGCCTTGCCACCTACACAGTTCACATTCCTCCAACGCCTGATAACCAGCCTATGGAGATTTCTCTGGAGAGGTCGAGTTCTCGGAGAGCGGAGGATCAATACGCTTCTAGTTCTTTGTTCACCGGAGGTTTTAACCAGCTCACACGTGCCCATTTGAAGGACAAGGTCATTGAGTCCGAATCCAGCCACCCCCAGATGGCTGGTGCAAAAGGGTCCTCATGTGCAGTGCCTGGGTGCGATGGAAAGGTCATGACTGACGAAAGAGGGTTGGATGTAGTCCCTTGTGAGTGTGATTACAAGATTTGTAGGGATTGTTACAGGGATGCTTTGAGGGCTGGCGAGGGGATCTGCCCTGGTTGCAAGGAGCCTTACAATGAGCCTGAGGTGAAATCACAGGCACTGCCTTTGCCTCCTGGTGCTGGGGTTAATAAGATGGAGAGGAGGTTGTCGTTGATGAAGTCAGGGGCGTTGACAAGGAGCCATACTAATGAGTTTGATCATGCTCAGTGGTTGTTTGAAAGCAAGGGGAGTTATGGATATGGGAATGCTATGTGGCCTAAAGAGTCTGAAGCTGATGCCAGTTCTGTTTCTGATTGGATGGGGGGTGACCCTAATGTATTCAATGAAAAGCAGTGGAAGCCCTTGACCCGGAAGTTGAGTATCTCTGCTGCAATTCTCAGTCCATATCGGCTCATTATATTTGTTCGGCTAGTGATTCTAGTTTTCTTTCTGAAGTGGAGGGTCCAAAACCCCAATGATGATGCAGTCTGGTTGTGGGGCATGTCTGTGGTTTGTGAAATCTGGTTTGCCTTTTCCTGGGTGCTTGACCAGTTTCCTAAGCTCTTCCCCGTAAATCGTGTTGCTGATCTTGATGTTTTGAAAGAGAAGTTTGAAACTCCTAATCCCAACAATCCTACTGGGAAGTCCGATCTTCCAGGAGTAGATATGTTCGTGTCAACTGCTGATCCAGAAAAAGAACCACCACTTGTTACTGCCAATACCATTCTTTCTATTCTAGCTGCTGATTATCCTGTTGAGAAACTCTCATGTTATGTCTCTGATGATGGAGGTGCGCTACTAACTTTTGAAGCAATGGCAGAGGCTGCAAGTTTTGCCAATTTGTGGGTTCCTTTTTGCCGGAAGCATGACATCGAACCCAGGAACCCAGAATCTTATTTTAGTCTCAAGAGAGATCCCTACAAGAACAAAGTACGCTCTGACTTTGTGAGGGACCGCAGACGAGTAAAACGTGAGTATGACGAGTTCAAGGTTCGGATTAATGGCCTTCCTGATTCAATCAGGCGGCGCTCTGATGCTTATAATGCTAGTCAAGAAATCAAAGCCATGAGGAAACGGAGAGAGAATGGAAATGAAGAACAAATGGAGAATTTAAAAATTCCTAAAGCTACGTGGATGGCTGATGGTACTCACTGGCCTGGCACTTGGACAATTGCGGCACCAGAGCATTCCAGGGGTGATCATGCCAGTATCATACAGGTAATGCTGAAACCCCCAAGTGATGAACCACTGCCTGGCACATCAGATTCAAATGCCTTGGATTTAACTGAAGTTGATATTCGTCTTCCCATGCTTGTCTATGTTTCTCGTGAAAAACGACCAGGCTATGATCACAACAAAAAGGCTGGGGCCATGAATGCCCTGGTTCGAGCCTCAGCCATAATGTCCAATGGCCCTTTCATTCTCAATCTTGACTGTGATCATTACATATATAACTCTGAGGCCCTGAGAGAAGGAATGTGCTTCATGATGGACCGTGGTGGAGACCGGCTCTGCTATGTCCAATTTCCTCAAAGGTTTGAAGGGATAGACCCCAACGATCGCTATGCCAATCACAACACTGTCTTCTTTGATGTCAATATGCGTGCTCTTGATGGAATTCAGGGTCCTGTGTATGTTGGCACTGGATGCCTATTTCGAAGAACTGCTCTCTATGGCTTTGATCCACCCCGGATCAAGGAAGAGGCCGGTTGGTTTGGTAGAAAGAATAAGAAATCCTCAACAGTGGCATCTGTCCCTGAAGCTGGTGCTGAGGAACAGGCATTGAGGAATAATGATATTGAGGATGAAGAAATGACCAGTGCTCTTGTTCCCAAGAAATTTGGCAACTCGAGTCTTCTTGTTGATTCAATCAGGGTGGCTGAGTTCCAGGGGCTGCCCCTTGCCGATCATTCATCCATCAAATATGGACGTCCACCTGGTGCTCTAACACTCCCTCGGGATCCTCTTGACGCTGCCACTGTTGCTGAGGCCATCAATGTCATCTCATGCTGGTATGAGGACAAGACTGAATGGGGCATTAGAATTGGATGGATTTACGGGTCAGTTACTGAAGATGTTGTGACTGGCTATAGAATGCACAATAGAGGATGGAGGTCTATATATTGTGTGACCAAAAGGGATGCATTCCGTGGCACTGCTCCAATCAATCTCACAGACAGGCTTCACCAGGTTCTTCGGTGGGCAACAGGCTCAGTTGAGATCTTCTTTTCACGCAACAATGCTCTTTTAGCCAGTTCTAGATTGAAATTTCTGCAGCGGATTGCTTACCTCAATGTTGGAATCTACCCTTTCACTTCCATCTTCCTTATTGTGTATTGCTTCCTTCCTGCTCTTTCACTTTTCACTGACCAGTTCATTGTTCAAAGCCTTCAAGTCAACTTCCTAGTTTACCTCTTGGGGATAACCTTGACCCTTGTCATCCTTGCTGTTTTGGAAATCAAGTGGTCTGGCATTGAGCTTGAAGAGTGGTGGAGGAATGAACAATTCTGGTTGATTGGAGGCACTAGTGCTCATCTTGCTGCTGTGCTTCAAGGTCTGCTAAAGGTGATGGCTGGCATTGAGATTTCATTCACTTTGACATCAAAATCTGCCGGTGATGACGAAAATGACGAATATGCGGATCTCTATGTCCTCAAGTGGACATCTCTTATGATACCACCAATCACAATCATGATGGTTAATTTGATAGCCATTGCTGTTGCAGTTAGCAGAACTATATACAGTGAGGATCGTCAATGGAGCAGTTTGCTTGGAGGTGTGTTTTTCAGCTTTTGGGTTTTGGCTCATTTGTATCCCTTTGCAAAAGGGCTAATGGGTAGAAGGGGTAGGACACCCACTATTGTATTTGTATGGTCAGGTCTAATATCAATCACTATCTCACTCCTTTGGGTTGCTATTGACCCTCCCTCCGGTAGCAGTCAAATCGGAGGGTCATTCCAATTCCCTTGA 3342 0.4623 MASKFKHGSSMVRKITQLSNDLDQEGENGSVGLATYTVHIPPTPDNQPMEISLERSSSRRAEDQYASSSLFTGGFNQLTRAHLKDKVIESESSHPQMAGAKGSSCAVPGCDGKVMTDERGLDVVPCECDYKICRDCYRDALRAGEGICPGCKEPYNEPEVKSQALPLPPGAGVNKMERRLSLMKSGALTRSHTNEFDHAQWLFESKGSYGYGNAMWPKESEADASSVSDWMGGDPNVFNEKQWKPLTRKLSISAAILSPYRLIIFVRLVILVFFLKWRVQNPNDDAVWLWGMSVVCEIWFAFSWVLDQFPKLFPVNRVADLDVLKEKFETPNPNNPTGKSDLPGVDMFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANLWVPFCRKHDIEPRNPESYFSLKRDPYKNKVRSDFVRDRRRVKREYDEFKVRINGLPDSIRRRSDAYNASQEIKAMRKRRENGNEEQMENLKIPKATWMADGTHWPGTWTIAAPEHSRGDHASIIQVMLKPPSDEPLPGTSDSNALDLTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSEALREGMCFMMDRGGDRLCYVQFPQRFEGIDPNDRYANHNTVFFDVNMRALDGIQGPVYVGTGCLFRRTALYGFDPPRIKEEAGWFGRKNKKSSTVASVPEAGAEEQALRNNDIEDEEMTSALVPKKFGNSSLLVDSIRVAEFQGLPLADHSSIKYGRPPGALTLPRDPLDAATVAEAINVISCWYEDKTEWGIRIGWIYGSVTEDVVTGYRMHNRGWRSIYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASSRLKFLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFTDQFIVQSLQVNFLVYLLGITLTLVILAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVMAGIEISFTLTSKSAGDDENDEYADLYVLKWTSLMIPPITIMMVNLIAIAVAVSRTIYSEDRQWSSLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLISITISLLWVAIDPPSGSSQIGGSFQFP* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00867 1113 Pfam RING/Ubox like zinc-binding domain 107 156 - -
Lapu2g00867 1113 FunFam Cellulose synthase-like protein D3 88 166 - -
Lapu2g00867 1113 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 546 700 IPR029044 -
Lapu2g00867 1113 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 243 1083 - -
Lapu2g00867 1113 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 166 IPR013083 -
Lapu2g00867 1113 Pfam Cellulose synthase 345 1102 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lapu2g00867 1113 MobiDBLite consensus disorder prediction 40 59 - -
Lapu2g00867 1113 SUPERFAMILY RING/U-box 94 160 - -
Lapu2g00867 1113 SUPERFAMILY Nucleotide-diphospho-sugar transferases 360 713 IPR029044 -
Lapu2g00867 1113 FunFam cellulose synthase-like protein D3 549 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00867 Lapu-Chr2 7978763 7983712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00867 13 1113 Glycosyltransferase AT3G03050 75.739 0.0 1756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00867 K20924 - gmx:100813900 2008.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00867 2 7978763 7983712 Lapu2g00867 2 7978763 7983712 ECH