Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00856 ATGAATGAGGTGGTGTTTGTAATGGCTAATTCAAGATTGAAAAGGAAAGTTATTCAAAAAACAAATGACTATAACATGGATGATCCTTATGATGATGAATGGACAATGGAGGATCATGAAGCAAATTCAACTTTGGATGCTTCAGATGAAGGCATCTTAGTTGAAGTTGGAGAAGATGCTAGTGGTGCTACTACATCTATGGATGATTTGGTGGTTCCTCCAATTGTTGATAATGATAAAGGTCATGGAGGAGACGACATTAATGAAAATGAAGATCATACAGAAATGGAAGTGACAACTGAAAAGGCATTGGATAGGATTGCACTCAAATTGAAGAGAAAGCGAGCTACCCAATATGCTGCACATATATGTGGAGCTTCACAGCCTTCAGGCAGGGTTGTAAAACAGATAAAATTGGGTGAATGTAGAAAAAAGCATGCAAATGCTGCTCCTCGTGTTGGGCAGTCCTTGAGCAACCGCTTTTTAAGCTACAAAAAAAGTGGGAGACCAGCACGTCTGATGTTCTATAAGAATGGCGAGTGGGTGGACTTTCCTAACAATATTCTTGACTTGGTTAAGAAAGATTTTGAAATCAAGAAGTCAGTTGTGGAGGTGGAGTTAAATGAGTATCATATGGTGTTAAATTTTTTCCATATGTACAATCTGAACATGAAAACTGGTTTGCAACAACCAATGGCTTGGATTGATGAGGCAGGAGCCTGCTTTTTCCCTGAGGTCTATGCTGCTTATGATGAAGAGCCTTATAATATCTGCAAACAGGTGATTGGAAAAAGTACAGAGTCATATGATTCTAACGAAATAAAATTACAATTACAAATTGAAATAAATGGGCTGGATCAGTGGAAGTTGAGGGAGTGTACTGAGGAGTCCAATTCTTTAGTTAAGGGTATTAGAATTGATACTAAACAAAAATGCTGTCCATATGATGTAGAAGTAGAAAATAGCATTAACAAAAGGGACTGTGGAAATGTTGATGAATCTATACAGCAAAATCAGGACATAGATTTAGATGCTTATACTGAATCTGTATATGGAAAGTTGGATTTGGATTCTGTACAGAAGATATTTCTCAAGGGAATGAACAATAGTGGTATTACTGATTCTAACATTGTTGGAACTGACCGGTGCTCAGGTACATCAATGCAAGCACGATTGGAGCTATTCCTGAAGCAAGCTGAAATTACCAAAAAATGTCATGGGGATGCTAATGTTCAGTATGCTTGGCTTGCTTCTACTAAAGGAGAACTGTATACGATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATCGAAAGGCACATATGGCATCGGTGTTCATCTCGCTGCTGTTACCTGCCCTGACACCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGTTCGATATTTGGTCCTTTGTCGTGTAATAATGGGGAACATGGAGATTCTCCGTCCAGGCACTGGTCAGTTCCAACCCAGTAGCTGTGAATATGATAATGGGGTGGATGACATTCATTGTCCGAGATATTATGTGGTGTGGAATATGAACATGAACACCCACATCTATCCAGAATTTGTTGTTAGCTTCAAGGTGTCTTTTGATGCTGAAGGTCTTTTTTGTGGAAGTGAAAGGAAGAATAATGTTTCTGGGGTTATGACAGCCTGCCATGGTCCTCAAGGACTGTTACATTCAGACTCTTGTGCAGTAGTTAAGGGAACAGCTGCCCTAAGAAGTCCAACATCGCCTTGGATGCCTTTTCCTTTGCTTTTTGCTGCTATCAGAAACAAGGTTCCTCCTAATGATATGGAACTTATCAGAAGACATTATGAACAGTTCAGGTCAAAGCAGATATCCCGAGATGATTTTGTGAAGATGCTGAGGTTGATAGTTGGAGATGCTCTATTGAAACTTGCTATGAAACAACTTCAATTGAAGATACCGTCCAATGTAAGGAATGATAAGGCTTTAGTTGCATGA 1983 0.3959 MNEVVFVMANSRLKRKVIQKTNDYNMDDPYDDEWTMEDHEANSTLDASDEGILVEVGEDASGATTSMDDLVVPPIVDNDKGHGGDDINENEDHTEMEVTTEKALDRIALKLKRKRATQYAAHICGASQPSGRVVKQIKLGECRKKHANAAPRVGQSLSNRFLSYKKSGRPARLMFYKNGEWVDFPNNILDLVKKDFEIKKSVVEVELNEYHMVLNFFHMYNLNMKTGLQQPMAWIDEAGACFFPEVYAAYDEEPYNICKQVIGKSTESYDSNEIKLQLQIEINGLDQWKLRECTEESNSLVKGIRIDTKQKCCPYDVEVENSINKRDCGNVDESIQQNQDIDLDAYTESVYGKLDLDSVQKIFLKGMNNSGITDSNIVGTDRCSGTSMQARLELFLKQAEITKKCHGDANVQYAWLASTKGELYTMMEYGLGHCRLSASKGTYGIGVHLAAVTCPDTSARYCDVDENGVRYLVLCRVIMGNMEILRPGTGQFQPSSCEYDNGVDDIHCPRYYVVWNMNMNTHIYPEFVVSFKVSFDAEGLFCGSERKNNVSGVMTACHGPQGLLHSDSCAVVKGTAALRSPTSPWMPFPLLFAAIRNKVPPNDMELIRRHYEQFRSKQISRDDFVKMLRLIVGDALLKLAMKQLQLKIPSNVRNDKALVA* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00856 660 Gene3D - 351 534 - -
Lapu2g00856 660 ProSiteProfiles RST domain profile. 579 650 IPR022003 -
Lapu2g00856 660 Pfam RCD1-SRO-TAF4 (RST) plant domain 580 645 IPR022003 -
Lapu2g00856 660 MobiDBLite consensus disorder prediction 79 99 - -
Lapu2g00856 660 MobiDBLite consensus disorder prediction 63 99 - -
Lapu2g00856 660 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 151 645 IPR044964 -
Lapu2g00856 660 SUPERFAMILY ADP-ribosylation 358 533 - -
Lapu2g00856 660 ProSiteProfiles PARP catalytic domain profile. 333 552 IPR012317 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00856 Lapu-Chr2 7800224 7815977 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00856 - - gmx:100800707 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00856 2 7800224 7815977 Lapu2g00856 2 7800224 7815977 ECH