Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00851 ATGTCGATAAAAACTGTCAAAGTCGTTAATGTTTCCTTGGGAGCAACTGAACAAGACATTAAGGAGTTCTTTTCATTTTCTGGTGAAATTGAATATGTTGAACTACACAGCCATGATGAACGATCTCAAACTGCTTATATTACCTTCAAGGAATCACAGGGAGCTGAGACTGCTGTACTTCTCTCGGGAGCAACGATAGTGGATATGTCAGTTACAATAACTCTGGATCCAGATTACCAGCTTCCACCGGCTGCCTTTACATCATCTGAAACTGACAGTCAAACTCCTGGTGGTGCTGAATTTGCTCTGCGGAAGGCAGAGGATGTGGTCTCTGGCATGCTGGCCAAGGGCTTTATCTTAGGGAAGGATGCTGTCAACCAAGCAAAAGCTTTTGACGATAAGCACCAGTTATCGTCCACAGCCTCAGCAAAAGTTGCTTCTTTTGATCAGAAAATTGGACTTAGTGAGAAAATAAGTGCTGGTGCTACAGTTGTGGGTGATAGAGTTCGAGAAGTGGATCAAAAATTTCAGGTTTCAGAAAAGACCAAATCAGCATTTGCAGCTGCAGAACAGACAGTCAGCAATGCTGGTTCTGCCATTATGAAAAATCGCTATGTGCTTACTGGGGCATCCTGGGTCACAGGTGCTTTTAGTAAGGTTTCTAAGGCCGCTGGGGAAGTAGGACAGAAGACTAGAGAGAAAGTGGAGAGTGAAGAAGAGCAACAGAAACGAAATGTGGAAGATCATCCTGCACAGGTCCTTTCTGAGGTCCCCAAAGCAGCAGAATCAAGTGAGCAGAAGCCTTCTAAGCCTGCTCCTGCTCAGGGTTTGATCCTTTGA 840 0.4476 MSIKTVKVVNVSLGATEQDIKEFFSFSGEIEYVELHSHDERSQTAYITFKESQGAETAVLLSGATIVDMSVTITLDPDYQLPPAAFTSSETDSQTPGGAEFALRKAEDVVSGMLAKGFILGKDAVNQAKAFDDKHQLSSTASAKVASFDQKIGLSEKISAGATVVGDRVREVDQKFQVSEKTKSAFAAAEQTVSNAGSAIMKNRYVLTGASWVTGAFSKVSKAAGEVGQKTREKVESEEEQQKRNVEDHPAQVLSEVPKAAESSEQKPSKPAPAQGLIL* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00851 279 Gene3D - 2 74 IPR012677 -
Lapu2g00851 279 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 4 242 - -
Lapu2g00851 279 SMART rrm1_1 5 74 IPR000504 GO:0003723
Lapu2g00851 279 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Lapu2g00851 279 MobiDBLite consensus disorder prediction 224 279 - -
Lapu2g00851 279 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Lapu2g00851 279 FunFam RNA recognition motif-containing protein 1 74 - -
Lapu2g00851 279 MobiDBLite consensus disorder prediction 226 250 - -
Lapu2g00851 279 SUPERFAMILY RNA-binding domain, RBD 3 76 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00851 Lapu-Chr2 7759754 7763223 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00851 - - gmx:100809613 469.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00851 2 7759754 7763223 Lapu2g00851 2 7759754 7763223 ECH