Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00776 ATGATGTTAGACGGAACCGAAGATGAAGAGAAGTTTCTTGCCGCCGGAATCGCCGGCCTTCAGCAGAACTCCTTCTACATGCACCGTGCATTGGATTCCAACAATCTCCGGGACGCTTTGAAGTATTCGGCTCAGATGCTCTCCGAGCTCAGGACTTCCAAGCTTTCTCCTCACAAGTACTACGAACTATATATGCGCGCCTTCGATCAGTTACGGAAGCTGGAGATGTTCTTCGAGGAAGAGACTCGTCGCGGTTGCTCCATTATTGATCTTTATGAACTTGTCCAGCATGCCGGAAACATTTTGCCTCGATTGTATCTCCTCTGTACAGTAGGATCAGTATACATCAAGTCCAAGGAAGCTCCTGCAAAGGATGTTCTTAAGGATCTTGTGGAGATGTGTCGTGGCATTCAGCACCCTGTTCGTGGACTCTTTCTAAGAAGTTACCTTTCTCAAGTTAGTAGGGATAAATTGCCAGATATTGGTTCAGAGTACGAAGGGGATGCGGATACTGTATCAGATGCTGTAGAATTTGTACTGCAAAATTTCACTGAAATGAACAAACTTTGGGTGCGGATGCAACATCAGGGGCCTGCCCGGGAGAAGGAGAAACGAGAAAAGGAAAGGAGCGAGTTGCGTGATCTTGTTGGGAAGAATCTTCATGTTCTCAGTCAAATAGAGGGTGTTGACCTAGATATGTACAAAGATGTTGTGCTTCCCAGAGTACTGGAGCAGGTTGTGAATTGCAAAGATGAGTTGGCTCAGTTCTACTTGATGGATTGCGTAATTCAAGTCTTCCCTGATGAGTATCACTTGCAAACTCTTGATGTGTTGTTGGGTGCTTACCCTCAACTTCAGCCGTCAGTTGACATCAAGACAGTGCTGTCTCAGTTAATGGAAAGGCTTTCGAATTATGCTGCTTCAAGTGCAGAGGTGTTGCCAGAGTTTTTGCAAGTGGAAGCATTTTCCAAATTAAGCAATGCCATTGGCAAGGTGATAGAGGCACAACCTGACATGCCCACTGTTGGAGTTGTAACTTTGTATTCATCACTTCTCACCTTCACGCTTCATGTCCACCCTGACCGACTTGATTATGCAGACCAAGTCTTGGGAGCATGTGTGAAAAAACTATCCGGCAAAGGGAAAATTGAGGACAACAAGGCAACTAAGCAGATTGTTGCTCTATTAAGTGCTCCACTAGAGAAATATAATGATATTATGACTGCATTGAAGCTTTCAAATTATCCTCGCGTAATGGAGTACCTTGATATTCCAACTACAAAGGTCATGGCAACTGTTATTATTCAAAGCATTATGAAAAATGGCACACACATTTCTACATCAGAAAAGGTTGACGCATTGTTTGAACTGATAAAGGGGCTCATCAAGGATTCTGATGGGATGCCTAAAGATGAGCTGGATGAAGACGATTTCAAAGAGGAGCAGAATTCTGTTGCCCGTTTGATCCAGATGCTTTATAATGATGATCCAGAAGAAATGTTTAAGATCATTGATACTGTGAGGAAGCACATACTGACTGGAGGACCAACACGTCTGCCTTTCACTGTTCCACCTCTTGTTTTTTCTTCTTTAAAGTTGGTCAGACAGTTGCAAGGTCAAGAAGAAAATCCTTTTGGAAATGATGCCTCAACAACACCAAAGAAAATTTTTCAGCTTTTAAATCAGACCATCGAGACCTTGTCAGGTGTCCTGGCACCGGAATTAGCATTGCAGTTGTACTTGCAATGTGCTGAGGCTGCGAATGACTGTGATTTGGAACCTGTAGCTTATGAATTTTTCACCCAAGCTTATATTCTTTATGAAGAAGAAATTTCTGATTCCAGAGCACAGGTCACAGCTATACATTTAATAATAGGGACTCTTCAAAGGATGCATGTCTTCGGTGTTGAAAACCGGGATACTTTAACTCACAAGGCCACAGGGTATTCTGCAAAGCTTTTAAAGAAGCCAGATCAATGCAGAGCTGTATATGCATGCTCACATCTATTTTGGGTTGATGATCATGATAACATGAAAGATGGAGAGAGGGTCCTATTATGTCTCAAACGGGCTTTACGAATTGCAAATGCTGCCCAACAAATGGCAAATGCAGCGCGAGGTAGCACGGGATCAGTAATGCTCTTCATTGAGATATTAAACAAGTATCTTTACTTCTTTGAGAAGGGAAACCTACAAGTCACCGTTGCTGCTATCCAGGGCCTAATTGAGTTAATTATGAATGAAATGCAGAGTGATGCCACGACTTCAGATCCAGCTGCCGATGCTTTCTTAGCCAGTACTATGCGATATATAGAGTTCCAGAAACAAAAAGGTGGGACCGTAGGCGAGAAGTATGAAGCCCTCAAGGTTTCACACGCAGGATGA 2385 0.4319 MMLDGTEDEEKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKYYELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVSDAVEFVLQNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLPRVLEQVVNCKDELAQFYLMDCVIQVFPDEYHLQTLDVLLGAYPQLQPSVDIKTVLSQLMERLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHPDRLDYADQVLGACVKKLSGKGKIEDNKATKQIVALLSAPLEKYNDIMTALKLSNYPRVMEYLDIPTTKVMATVIIQSIMKNGTHISTSEKVDALFELIKGLIKDSDGMPKDELDEDDFKEEQNSVARLIQMLYNDDPEEMFKIIDTVRKHILTGGPTRLPFTVPPLVFSSLKLVRQLQGQEENPFGNDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQVTAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQCRAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILNKYLYFFEKGNLQVTVAAIQGLIELIMNEMQSDATTSDPAADAFLASTMRYIEFQKQKGGTVGEKYEALKVSHAG* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00776 794 PIRSF Retromer_Vps35 2 793 IPR005378 GO:0015031|GO:0030906|GO:0042147
Lapu2g00776 794 SUPERFAMILY ARM repeat 208 513 IPR016024 -
Lapu2g00776 794 Gene3D - 465 775 IPR042491 -
Lapu2g00776 794 FunFam Vacuolar protein sorting-associated protein 35 466 775 - -
Lapu2g00776 794 SUPERFAMILY ARM repeat 465 752 IPR016024 -
Lapu2g00776 794 PANTHER VACUOLAR SORTING PROTEIN 35 6 789 IPR005378 GO:0015031|GO:0030906|GO:0042147
Lapu2g00776 794 Pfam Vacuolar protein sorting-associated protein 35 13 747 IPR005378 GO:0015031|GO:0030906|GO:0042147
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00776 Lapu-Chr2 6941497 6951745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00776 K18468 - gmx:100811902 1501.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00776 2 6941497 6951745 Lapu2g00776 2 6941497 6951745 ECH