Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00750 ATGGCCATCAAAAAATCCAACAAACTACCGCAAGCTGTTGTTCTCAAGCAAATTGTCAAAAGATGCTCAAGTTTTGGTAAGAAGCAGACCTACAATGAAGAGGGTCTTCCTGATGATGTGCCAAAAGGCCATTTCGTGGTCTATGTTGGGGAGAACAGGACCAGATACATTATCCCAATCTCATGGCTGGCCCATCCCCAGTTTCAAAGTCTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAACCATGACATGGGACTTACCATACCCTGTGATGAAGTTGTATTTGAGTCCTTAACCTCCATGATGAGATAA 315 0.4444 MAIKKSNKLPQAVVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFVVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFESLTSMMR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00750 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 35 102 IPR003676 GO:0009733
Lapu2g00750 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00750 Lapu-Chr2 6649891 6650937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00750 5 103 Calmodulin-binding Proteins AT4G34750 40.404 6.79e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00750 K14488 - gmx:100798840 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu9g02286 9 37443914 37444219 Lapu2g00750 2 6649891 6650937 ECH
Lapu11g00819 11 10974742 10975056 Lapu2g00750 2 6649891 6650937 ECH
Lapu2g00750 2 6649891 6650937 Lapu2g00750 2 6649891 6650937 ECH
Lapu9g02452 9 38924790 38925107 Lapu2g00750 2 6649891 6650937 ECH