Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00819 ATGGCCATCAGAAAATCAAACAAGCTTCCACAACACGCAGTTTTGAAGCAGATCCTTAAGAGGTGTTCTAGCCTAGGAAAGAAAAACGGGTACGATGATGATGGCCACCCTGGTGATGTCCCAAAAGGCCATTTTGCCGTTTATGTGGGCGAAAACAGAAGTAGGTACATTGTGCCAATCTCATTCCTCGCTCATCCTGAGTTCCAATCCCTCCTTCGACAAGCTGAAGAAGAATTTGGCTTCGATCACGAGATGGGCCTCACTATTCCTTGCGAAGAAGTTGTCTTCAGGTCTCTAACATCATCGTTGAGATGA 315 0.4603 MAIRKSNKLPQHAVLKQILKRCSSLGKKNGYDDDGHPGDVPKGHFAVYVGENRSRYIVPISFLAHPEFQSLLRQAEEEFGFDHEMGLTIPCEEVVFRSLTSSLR* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00819 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
Lapu11g00819 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00819 Lapu-Chr11 10974742 10975056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00819 19 99 Calmodulin-binding Proteins AT3G43120 49.383 3.54e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00819 K14488 - gmx:100790342 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00819 11 10974742 10975056 Lapu11g00819 11 10974742 10975056 ECH
Lapu11g00819 11 10974742 10975056 Lapu2g00750 2 6649891 6650937 ECH