Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00748 ATGGACCGCCGGGGTTGGCTCTGGAAGAAAAAATCATCTGATAAAAGCATAAAGGTTGAGGATGAGAAACCTGTGTCTGCTTATGAATCTGTTGTTTCAACCTTGTCTTCTGTGGCACATGTAGATCAGCAAGACAACAGCAAAAATAAAGACTACGTTCAGATACCCATGGAGTCATATACTCGTATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAACTAAAAGCTTTGGAAGCAAAGCTATCTTCAGTTTATTCAGAATTAAATAACAAGGATAATCTAGTTAAACAGCATGCAAAAGTTGCGGAGGAAGCAGTGTCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCCTAAGACGTCAACTTGAATCTGTGTCTCTCTCTAAGCTTACTGTTGATGAGAAAGCAGCTCACCTAGATGAAGCCCTAAAAGAGTGCATGAAGCAGATAAGAGTAGTAAAGGAGGAAAGTGAGCATAAATTGCAGGAAGTGATTCTTGTGAAATCTCATCAATGGGAGAAAATCAAGTTAGAACTTGAAGCTCAGATAGACAATTTGGATGAAGGACTTCGTGAGTTAGCCAGTGAAAATTCTGCGCTTCTAAGATCCCTTCAAGAAAGTTCGAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGCTGAGGGAGAGGTAGAGCTTCTAACGAAGGGTGTTCAGTCAAAAGAAAAAGAAATATCTTCTTTGAAGTATGAGCTGCATGTAATTTCAAAGGAGCTGGATATTCGAAACGAAGAGAAGAATATGATTATGAGGTCAGCAGAAGTGGCAAACAAGCAACACACAGAGGATGTCAAGAACATTGCCAAGCTAGAGAATGAGTGCCAACGACTTCGTGGTCTGTTGAGAAAGAAGTTACCCGGGGCTGCTGCATTGGCACAAATGAAGCTAGAAGTTGAGAGTTCACATCATGTCATCAGTGCATTCCATCCAAGAAAAACTACTTCAAAAAGTGATAACCTGCAAGAATCTGAGTTTCTTTCCAAACAATTACAGGTGTTGGAAGAAGAAACAAGGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAAAAACTTGTATGCTAAAACAGTTGGCAGACTTAAGCGCTTGGAAGCAGAGATACATCAAGAAAGAAGCACCCAGAAAGCAATTTTAGCAACCAATTATGGAAACTCCTTTAGAAGAATTTGCAGCTACTCACCGAGCATTACTTCTATCTCTGATAATGGGCATGAGGATCCAGAAAGTCCTGTTGAGTCCTGTGCAGCATCAACTCTTGACCATTCTGATATCAACAGGGTTGGAAGTGTAGGTAAATTTGAGAATCATACGAGTGAAACTATCTCAGAACTTATGGATGACTTTCTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTGGAATCATTAGTAAAACTAACGATACTGCTGAAGATAAAAAGAAGACTAGTTGTTTATCTTCAAATCAAAATTGTTTTGACTCGACAAACCAAACTATAGAAGCTGAGGCTAAAAGTAATTACCTTGATAAGGCAGCTGAGCATGATGAGCATATGCAAGATCTTAACGAAAAAAAGCTGATGTTACAGGAAAATATGCAACTTCTAGAAGAACTGAAAGCACAATTAGCGTCGTCCCACAAATCATGCAGTTTAACTGAAATTCAGCTGAAATGTATGACTGAGTCTTACAAGTCTCTTCAAACTCGTGTAGAGGAGTTAGAAACTGAAAATAAATATTTAATGGAAAAGATGGATGAGCTAAAGAATGATCTTGCAGAGGAAAAACAAAGTCATCATGATGCTTTGGTGAGATACAAAGAAATTGAAGAGAAAACGCAAAGGAACCAGTGCTTGGTATGTGCGTCGAATTCAGCAGCAAATTCTGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAAGCTGGCAGAATGCCAGGAGACTCTTTCTATACTTGGTAGACAGTTGCAAGCCATGTGCCCCCAGATAGGTGTAACCACTACTCATCATAGTAAAAGGCTTCAAGTGAAAGAAAAGTTAGCCAAACCATCCTATGGCTGGTCTAATTCTTGTGGATCCTGTAACTCAAATGAATTTGACCATGCTGAGGCGTGTAGCGTAGCTTCTGACATTCAAGGAGTAACTGATGAGTTTTCATCGCATAACTCGGGTGCCACATCATGCCCTTCAGACACCGAAGGCAACTTTTGGTTAAACTCTTAA 2286 0.3998 MDRRGWLWKKKSSDKSIKVEDEKPVSAYESVVSTLSSVAHVDQQDNSKNKDYVQIPMESYTRMSGLEDQVVNLEDQLKALEAKLSSVYSELNNKDNLVKQHAKVAEEAVSGWEKADAEVVSLRRQLESVSLSKLTVDEKAAHLDEALKECMKQIRVVKEESEHKLQEVILVKSHQWEKIKLELEAQIDNLDEGLRELASENSALLRSLQESSNKIVKLKEEKSEAEGEVELLTKGVQSKEKEISSLKYELHVISKELDIRNEEKNMIMRSAEVANKQHTEDVKNIAKLENECQRLRGLLRKKLPGAAALAQMKLEVESSHHVISAFHPRKTTSKSDNLQESEFLSKQLQVLEEETRTLKEALASSNAELQASKNLYAKTVGRLKRLEAEIHQERSTQKAILATNYGNSFRRICSYSPSITSISDNGHEDPESPVESCAASTLDHSDINRVGSVGKFENHTSETISELMDDFLEVEKMACLSDNGGVPLGIISKTNDTAEDKKKTSCLSSNQNCFDSTNQTIEAEAKSNYLDKAAEHDEHMQDLNEKKLMLQENMQLLEELKAQLASSHKSCSLTEIQLKCMTESYKSLQTRVEELETENKYLMEKMDELKNDLAEEKQSHHDALVRYKEIEEKTQRNQCLVCASNSAANSGKDKELAAAEKKLAECQETLSILGRQLQAMCPQIGVTTTHHSKRLQVKEKLAKPSYGWSNSCGSCNSNEFDHAEACSVASDIQGVTDEFSSHNSGATSCPSDTEGNFWLNS* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00748 761 MobiDBLite consensus disorder prediction 741 761 - -
Lapu2g00748 761 Coils Coil 180 242 - -
Lapu2g00748 761 SUPERFAMILY Tropomyosin 62 262 - -
Lapu2g00748 761 Coils Coil 649 676 - -
Lapu2g00748 761 Coils Coil 526 563 - -
Lapu2g00748 761 Coils Coil 271 291 - -
Lapu2g00748 761 Coils Coil 334 389 - -
Lapu2g00748 761 Coils Coil 578 626 - -
Lapu2g00748 761 Coils Coil 63 90 - -
Lapu2g00748 761 Coils Coil 140 160 - -
Lapu2g00748 761 Pfam Filament-like plant protein, long coiled-coil 499 683 IPR008587 -
Lapu2g00748 761 Pfam Filament-like plant protein, long coiled-coil 94 519 IPR008587 -
Lapu2g00748 761 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00748 Lapu-Chr2 6631428 6636054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00748 - - gmx:100809230 1212.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00748 2 6631428 6636054 Lapu2g00748 2 6631428 6636054 ECH