Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00704 ATGGTTAAGAAGACGGTCTTGAAGGTTGATATCACTTGTGTCAAATGCAAACGGAAACTCCTCAAGACTGTGTCTTCACTTCAAGGGGTGGATAAAATTGAAGCTGATGAAGGGAAGGGTACGTTGACCGTGACAGGGGATGCAGACCCATACGAAATAATAGTTCGCATTAGGAAAGCTGGGAAACATGCTGAAGTCGTCAGTGTTGGGCCTCCCCCGGCCCCTCCCAAACAAGACCAGAAGAAGCCCGATGAGAAAAAGCCCGAAGAAAAGAAGAAGCCCGACCCAGTGAAGCAAGAACAAAAACCGAATGAGCCCTACTTGCAGATGCCTTATTACTACCCACCACACCAACCGGTAGTAGTGTACGCGAACAGATACGAGGAGCCCAATCCATCTTGCACTATATTGTGA 414 0.4807 MVKKTVLKVDITCVKCKRKLLKTVSSLQGVDKIEADEGKGTLTVTGDADPYEIIVRIRKAGKHAEVVSVGPPPAPPKQDQKKPDEKKPEEKKKPDPVKQEQKPNEPYLQMPYYYPPHQPVVVYANRYEEPNPSCTIL* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00704 137 CDD HMA 6 65 IPR006121 GO:0046872
Lapu2g00704 137 MobiDBLite consensus disorder prediction 78 100 - -
Lapu2g00704 137 MobiDBLite consensus disorder prediction 63 113 - -
Lapu2g00704 137 Pfam Heavy-metal-associated domain 7 63 IPR006121 GO:0046872
Lapu2g00704 137 Gene3D - 1 72 - -
Lapu2g00704 137 ProSiteProfiles Heavy-metal-associated domain profile. 2 65 IPR006121 GO:0046872
Lapu2g00704 137 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 3 108 - -
Lapu2g00704 137 SUPERFAMILY HMA, heavy metal-associated domain 1 67 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00704 Lapu-Chr2 6193605 6194175 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00704 - - pvu:PHAVU_002G033800g 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00704 2 6193605 6194175 Lapu2g00704 2 6193605 6194175 ECH