Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00701 ATGAAGCATTTTGCCTTGGTCTTTCTTTTGGCCATTCTGGTCCCTCAAGAGTGTTTCCGTGCCACCGTGGAAGCAAGGGATGCTTTCGTCAGAACCAGAGGCATCCACTTCATGCTGAATGGATACCCTTACTATGCAAATGGCTTCAACGCCTACTGGTTAATGTACACAGCTTCTGACCCTTCTCAGAGGTTCAAGGTTTCAAATGCCTTCCGAGAAGCAGCAAGTCATGGCCTTACTGTTGCCAGAACTTGGGCCTTCAGCGATGGTGGCTATAGACCCCTGCAATATTCCCCTGGCTTCTATAATGAGCAAATGTTCACTGGGTTGGATTTCGTCATATCTGAGGCCAGAAAGTACGGAATTAAGCTAATACTGAGCTTGGTGAACAACTATGAAAACTTTGGAGGCAAGAAGCAGTATGTGAACTGGGCTAGAAGTCACGGGCAGTATCTTACTTCTGATGACGATTTCTTCAGAAGCCCTGTTGTTAAGGGTTACTACATGAACCATGTCAGGACTGTTCTTAACAGACACAACAGATTTACTGGTACCCACTACAAAGATGACCCAACAATCATGGCGTGGGAGCTTATGAATGAGCCCAGGTGTACATCGGATCCTTCAGGAAAGACTATACAGGCGTGGATCACGGAAATGGCTTGGTTTGTGAAGTCGATAGACAGGAACCACTTATTGGAGGCAGGACTGGAAGGGTTTTACGGTCAATCCACACCACAGAGAAAAAGATTGAATCCTGGTTTCGACATAGGAACAGACTTCATTGCAAATAACCGAATCCCAGCCATTGATTTTGCAACAGTCCACTGTTACCCCGACCAATGGGTATCGAGCTCAAATGAGCAGTATCAGCTTTCGTTCTTGAACAACTGGCTGAGTGCTCACTTCACGGACGCGCAATACGCTATAAGGAAACCGATTCTGGTGGCAGAATTTGGGAAATCGTTTAGGGGTTCGGGGTACGAGAGGGATGAAGTGTTCAATGCAGTGTATTACAAAATATACGCTTCGGCTAAGAGAGGAGGAGCAGCGGGGGGAGCGTTGTTCTGGCAGCTTCTGACGGGGGGAATGGAATCTTTCCAAGACGGATATGGAATCATGCTTGGCCAGAGTTCCTCTACGGCCGATCTCATTGCGCGCCAGTCTCGGAAGCTTTATCTGATTCGGAAGATCTTCGCTAGGGTGGAGAACATGCGGCGATGGCGAAGGGGAAGATCCAGAGCCAACAGAGGATTTTCTGGCTCTGGAGGTGGAAACGGAGGCGGTCACGTTGGCAACTGA 1302 0.4823 MKHFALVFLLAILVPQECFRATVEARDAFVRTRGIHFMLNGYPYYANGFNAYWLMYTASDPSQRFKVSNAFREAASHGLTVARTWAFSDGGYRPLQYSPGFYNEQMFTGLDFVISEARKYGIKLILSLVNNYENFGGKKQYVNWARSHGQYLTSDDDFFRSPVVKGYYMNHVRTVLNRHNRFTGTHYKDDPTIMAWELMNEPRCTSDPSGKTIQAWITEMAWFVKSIDRNHLLEAGLEGFYGQSTPQRKRLNPGFDIGTDFIANNRIPAIDFATVHCYPDQWVSSSNEQYQLSFLNNWLSAHFTDAQYAIRKPILVAEFGKSFRGSGYERDEVFNAVYYKIYASAKRGGAAGGALFWQLLTGGMESFQDGYGIMLGQSSSTADLIARQSRKLYLIRKIFARVENMRRWRRGRSRANRGFSGSGGGNGGGHVGN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00701 433 Gene3D Glycosidases 25 396 - -
Lapu2g00701 433 PANTHER - 3 414 IPR045053 GO:0004553
Lapu2g00701 433 Pfam Cellulase (glycosyl hydrolase family 5) 66 326 IPR001547 GO:0004553|GO:0071704
Lapu2g00701 433 MobiDBLite consensus disorder prediction 413 433 - -
Lapu2g00701 433 FunFam Mannan endo-1,4-beta-mannosidase 6 26 396 - -
Lapu2g00701 433 SUPERFAMILY (Trans)glycosidases 29 383 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00701 Lapu-Chr2 6149656 6153133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00701 1 421 Glycoside Hydrolase AT5G66460 66.432 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00701 K19355 - gmx:100792073 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00701 2 6149656 6153133 Lapu2g00701 2 6149656 6153133 ECH