Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00659 ATGAAGTGCCCCTATTGCTCGGCGGCGCAGGGGCGTTGCGCGACGACGAGTAGCGGCCGGTCGATCACGGAGTGCACGTCTTGCGGGCGCGTGATGGAGGAGCGGCAGTCGCATCCTCACCACGTGTTTCACATGCGCGCCCAAGACAACCCTCTGTGTCTCGTCACATCGGATCTTCCTCTCCCTCTCCCTCTCAATCAGAACGACGAGGAGGACCCGTTCGAGCCAACGGGCTTCATCACTGCCTTCTCCACGTGGGCCCTCGAGCCCAGCCCACTTTACCTTCAGTCATCCCTCTCCTTCTCCGGCCACCTCGCCGAGCTCGAACGGACTCTGGAATCCTCCTCTTCCTCCTCGTCTTCTTCGTCGTCGACGGTTGTGGTTGATAATCTGAGGGCGTACATGCAGATTATCGATGTGGCGTCAATTCTAGGGTTGGACTGCGACATTTCCGACCACGCTTTTCAGTTGTTCAGGGATTGTTGTTCCGCCACGTGTTTGAGAAACCGCAGTGTGGAGGCGCTTGCCACTGCCGCTCTCGTTCAGGCCATCAGAGAGGCTCAAGAGCCCAGAACCCTTCAGGAAATTTCAATTGCAGCTAATGTGCCACAAAAGGAAATTGGGAAATACATTAAGATACTGGGAGAGGCTTTGCAGCTAAGTCAACCTATTAACAGCAATTCCATTTCAGTTCATATGCCAAGGTTTTGCACGCTTCTTCAGCTCAATAAATCTGCCCAGGAACTGGCTACTCACATTGGAGAGGTCGTGATCAACAAATGCTTCTGTACTCGCAGGAATCCTATTAGCATCTCAGCTGCTGCTATATATTTGGCTTGCCAACTGGAAGACAAACGCAAAACCCAGGCAGAAATTTGTAAGGTGACTGGTCTTACTGAAGTCACTCTCCGTAAAGTGTACAAGGAACTATTGGAGAATTGGGATGATTTGCTTCCCTCTAATTACACCCCTGCTGTTCCTCCAGAGAGGGCATTTCCCACAACTATAATTGCTTCTGGTCGTTCTTCAACAGCTAAGGTTGATGCTGTAGAGGCTATTTCTTCGTTGGACTCAGAAAAGTTAATTGATATTAAACCTAGCAAACCTAATGAGGTCTCAGGCATAGTTCATCAGCCCAGGGGGAAGGATGAGGCTGAAGGTAAAGACAATGCTCATGCAAGCCATTCCACACTAAATCAACAGTCAACTTTTTGGCAATCCCAGCTTCCCAGTGGTACCCACAATCATCAGAATGTTTTACAAGGAATGGATATCGATGTATTGCAGCGAAACCACCAACAGCCTGAACACATGGCAGAGGATACAAATGGTGCTGCAAACGGTAATTCTCTAAAATCAAGCCAACTTTGCAGTCCTCCTGCTTCGAGTGCAAGTTCTGTTATGAGGCAGTTTTCAGCTCCCCCTTTAGCTAGCCCTTCAAATGTTCGATTAGGACAGTCACCTAAGATAATGCCAGGTTATCCGGAGCACTGA 1494 0.4967 MKCPYCSAAQGRCATTSSGRSITECTSCGRVMEERQSHPHHVFHMRAQDNPLCLVTSDLPLPLPLNQNDEEDPFEPTGFITAFSTWALEPSPLYLQSSLSFSGHLAELERTLESSSSSSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPTTIIASGRSSTAKVDAVEAISSLDSEKLIDIKPSKPNEVSGIVHQPRGKDEAEGKDNAHASHSTLNQQSTFWQSQLPSGTHNHQNVLQGMDIDVLQRNHQQPEHMAEDTNGAANGNSLKSSQLCSPPASSASSVMRQFSAPPLASPSNVRLGQSPKIMPGYPEH* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00659 497 MobiDBLite consensus disorder prediction 433 497 - -
Lapu2g00659 497 Gene3D - 131 222 - -
Lapu2g00659 497 MobiDBLite consensus disorder prediction 438 485 - -
Lapu2g00659 497 Gene3D - 231 327 - -
Lapu2g00659 497 MobiDBLite consensus disorder prediction 364 395 - -
Lapu2g00659 497 FunFam Transcription initiation factor IIB 231 328 - -
Lapu2g00659 497 SUPERFAMILY Cyclin-like 229 327 IPR036915 -
Lapu2g00659 497 MobiDBLite consensus disorder prediction 377 391 - -
Lapu2g00659 497 SUPERFAMILY Cyclin-like 132 222 IPR036915 -
Lapu2g00659 497 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 1 385 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 SMART cyclin_7 135 216 IPR013763 -
Lapu2g00659 497 SMART cyclin_7 231 312 IPR013763 -
Lapu2g00659 497 FunFam Transcription initiation factor TFIIB 131 222 - -
Lapu2g00659 497 Pfam Transcription factor TFIIB repeat 231 312 IPR013150 GO:0017025
Lapu2g00659 497 Pfam Transcription factor TFIIB repeat 133 214 IPR013150 GO:0017025
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 18 38 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 177 196 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 203 218 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 232 250 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 298 312 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 PRINTS Transcription initiation factor IIB signature 266 282 IPR000812 GO:0006352|GO:0070897
Lapu2g00659 497 CDD CYCLIN_TFIIB_archaea_like_rpt2 228 314 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00659 K03124 - gmx:102662353 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00659 2 5777427 5788734 Lapu2g00659 2 5777427 5788734 ECH