Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00642 ATGGAAGACACACTTTCAGGGTTGAGGTCTTTGATGCTTACTCACTCTCCTCCACTCGATGCCTTAGTTGTGCCCTCTGAAGATTATCACCAGAGCGAATACGTATCTGCACGGGACAAGCGCCGCGAATTCGTTTCCGGCTTCACTGGAAGCGCTGGCTTAGCACTTATTACGAAGAGTGAAGCGCTGCTGTGGACGGATGGAAGATATTTTTTGCAGGCTGAGCAAGAACTCAGTGCTCAATGGAAGCTAATGCGTATCGGTGAAGATCCTGCTGTAGATATCTGGATAGCTGATAACTTGCCAAAAGAGGCATTTATTGGGGTAGACCCTTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAGCGAGCTTTTGCCGAAAAACAGCAGAAGCTGGTTCAAACCTCAAAAAATTTGGTAGATGAAGTTTGGATAAATCGACCACAGGCAGAGATTAATGCTGTTATTGTACATCCACTGAAATTTGCAGGTCGCTCTGTTGCAGATAAGTTAAAAGATTTGAGAAAAAGGCTTCTACAGGAGCAAGCCCGTGGTATAATTTTCACAGCACTTGATGAAGTTGCGTGGTTGTATAATATTCGTGGAAGTGATGTGGCCTACTGTCCTGTTGTTCATGCATTTTCTATTGTGACAGCCAATACTGCTTTCATTTATGTGGATAAGCGAAAGGTTTCTGTTGAGGTTCAAGCTCATTTAGTGGAAAATGAAATTGAAATTCGAGAGTATACTGCCGTAAGCTCTGATGTGACATTACTTGCAACCGATGAGCTTGATACTGTATCTACGGTCAAGAGAGTAAATGGTGGACATCAAGCAGAAGAAAATAGCGGCAACCTCATATGGGCTGATCCTGGTTCATGCTGCTATGCACTATATGCAAAGTTGAACCCTGATACAGTTCTGTTACAGCAATCACCTTTGGCCCTTGCAAAAGCTTTAAAGAACACAGTGGAATTGGATGGGTTAAAAAAGGCACATATCCGTGATGGTGCAGCGGTCGTGCAATATCTTGTGTGGCTGGATAAGAAGATGCAGGATGTTTATGGAGCTTCTGGGTACTTTTTGGAGAAGGATTCTGTGAAAAAGGAGAAACATTCGCAGTCCTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAAGTTTCCGCGCATCCAAAGAGCATTTCAAAGGATTGAGTTTCCCCACTATTTCGTCAGTTGGCCCAAATGCAGCTATCATTCATTATTCTCCAAAGGCAGAGGCATGTGCTGAACTTGATCCAGACAAAATTTATCTCTTTGATTCTGGAGCCCAGTATCTAGATGGAACAACCGATATTACACGAACAGTTCATTTTGGGAAACCTTCAACTCATGAAAAAGCGTGTTATACAGCAGTCCTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCCAATGGGACAAATGGGCATGCTCTTGATATTCTTGCCCGAATTCCTTTGTGGAAAGATGGTCTTGATTATCGACATGGTACTGGTCATGGAATTGGGTCCTATCTCAATGTTCATGAAGGACCTCACCTAATCAGTTTCAGACCGCAGGCTCGAAATGTACCTTTGCAATCTTTCATGACTGTTACAGATGAACCTGGTTACTACGAGGATGGAGAGTTTGGGATAAGATTGGAGAATGTGCTTATTGTCAAGGAGGCTGATACAAAATTCAATTTTGGTGATAAAGGTTACTTATCTTTTGAGCACATTACCTGGGCACCATATCAAACGAAGTTGATTGATCTGAAACTTTTAAGTCCTGACGAAATAAATTGGCTGAACTCCTATCACTCCACATGTAGAGATATTCTAGCGCCATATTTGGATGAAGTTGAAAATGCTTGGCTGAAGAAAGCTACTGAACCTGTAGGTGCATGA 1923 0.4259 MEDTLSGLRSLMLTHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALITKSEALLWTDGRYFLQAEQELSAQWKLMRIGEDPAVDIWIADNLPKEAFIGVDPWCISIDTAQRWERAFAEKQQKLVQTSKNLVDEVWINRPQAEINAVIVHPLKFAGRSVADKLKDLRKRLLQEQARGIIFTALDEVAWLYNIRGSDVAYCPVVHAFSIVTANTAFIYVDKRKVSVEVQAHLVENEIEIREYTAVSSDVTLLATDELDTVSTVKRVNGGHQAEENSGNLIWADPGSCCYALYAKLNPDTVLLQQSPLALAKALKNTVELDGLKKAHIRDGAAVVQYLVWLDKKMQDVYGASGYFLEKDSVKKEKHSQSLKLTEVTVSDQLESFRASKEHFKGLSFPTISSVGPNAAIIHYSPKAEACAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQSFMTVTDEPGYYEDGEFGIRLENVLIVKEADTKFNFGDKGYLSFEHITWAPYQTKLIDLKLLSPDEINWLNSYHSTCRDILAPYLDEVENAWLKKATEPVGA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00642 640 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 507 519 IPR001131 -
Lapu2g00642 640 PANTHER XAA-PRO AMINOPEPTIDASE 1 3 638 - -
Lapu2g00642 640 Pfam Creatinase/Prolidase N-terminal domain 147 326 - -
Lapu2g00642 640 Pfam C-terminal region of peptidase_M24 579 637 IPR032416 -
Lapu2g00642 640 FunFam Probable Xaa-Pro aminopeptidase P 146 318 - -
Lapu2g00642 640 Pfam Creatinase/Prolidase N-terminal domain 8 142 IPR000587 -
Lapu2g00642 640 FunFam Xaa-Pro aminopeptidase P 320 638 - -
Lapu2g00642 640 SUPERFAMILY Creatinase/aminopeptidase 324 604 IPR036005 -
Lapu2g00642 640 Gene3D Creatinase/methionine aminopeptidase superfamily 320 638 IPR036005 -
Lapu2g00642 640 Gene3D - 146 318 IPR029149 -
Lapu2g00642 640 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 130 IPR029149 -
Lapu2g00642 640 Coils Coil 119 139 - -
Lapu2g00642 640 Gene3D - 1 145 IPR029149 -
Lapu2g00642 640 CDD APP 329 575 IPR033740 GO:0070006
Lapu2g00642 640 Pfam Metallopeptidase family M24 331 567 IPR000994 -
Lapu2g00642 640 FunFam Xaa-pro aminopeptidase P 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00642 Lapu-Chr2 5626909 5635224 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00642 K01262 - gmx:100803268 1194.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00642 2 5626909 5635224 Lapu2g00642 2 5626909 5635224 ECH