Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00447 ATGGTTCCCAAAGTTTATGCTGGCCAGGAAATGACAATGGTTGAGAATGAGAGTTGCATAATAAATGGGAACTGGAAGAAACGTGTGCATGTTTTTGGTGAGAGGGTGATGAGACTTCCTACTAAGGCTTGGCAAACTACGTGGAGGGTGGGGCGTGAAGATCCAAGAAGGTTGATCCATGCATTCAAAGTGGGTTTGTCTCTCACTCTGGTTTCTTTGTTGTATTTGTTGGAGCCGTTTTACAATAGCATTGGACAGAGTGCTATTTGGGCTGTCATGACTGTGGTGGTTGTGTTGGAATTCACAGCAGGCAAGGGCAACTTTGTGCAAAGGGCTCAACAGAGGATTGGGAACACTTTTAGCAGGATTATTGGCATTTATTGTTGGGTATATTGCAAATGCATCTGGCCGAGAGCTCTAGCCACTTATATGAGGTTTATTCCCTACATAAAGAAGAATTATGACTATGGTATAGTTATATTTCTCTTGACTTTCAACCTGATTGCTGTGTCAAGCTACCGGGTTGATAATGTGTTGAAGATTGCACATGAGCGTGTATACACCATTGCCATAGGCTGTGCTGTTTGCCTTCTCATGAGTCTACTGGTATTTCCAAATTGGTCAGGAGAAGACCTCCATAATTCCACGGTTTACAAGCTTGAAGGCCTTGCCAAATCAATAGAAGCTTGTGTGAATGAATACTTTTATGGAGAAATAGAAGGATCTGGAGATATGAAATTGTCTGAGGATCCAATATACAAAGGTTATAAGGCTGTTTTGGATTCAAAATCCATTGATGAAACTCTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCAAGGTACTGTCATAGATTTCCATGGCAGCAGTATGTAAAAGTTGGAGCTGTTCTGCGTCAATTTGGTTATACTGTGGTGGCCCTACATGGCTGTTTGAGAACAGAAATCCAGACGCCACGATCAGTCAGAGCCATGTTCAAGGACCCTTGCATTCGGCTTGCGGCAGAGGTATCGAAAGTACTGATAGAACTTTCTAACAGCATAAGGAATCGCCGCCATTGCTCTCCAGAAATACTCTCTGATCATCTGCATGAAGCCCTGCAAGACCTCAACACTGCCATAAAATCTCAACCTCGCCTCTTCTTAGGTCCCAAACACAGGCACAACCAAGCCAGCAACATGTTCAAAATAGCCGCTGAACAAGTTGGACATGGAAAGACCTCCCTCTCAAGTGTTAAAACCGACTCTTCAGCATTGCTAGAGTGGAAAAACAAAAGGGTTACCACTGAACAGACAAAGGAATCAGAACGAAAGTCTCTAAGGCCCCAACTGAGTAAAATTGCAATCACTAGCCTTGAGTTCTCCGAGGCTCTTCCTTTTGCTGCCTTTGCATCTTTGCTTGTGGAAACTGTTGCTAAACTGGATCTTGTCATAGAGGAAGTTGAGGAACTGGGGAGACTAGCGTGCTTTAAAGAGTTCATACCTGGTGATGAGTTTGTTGTGACTTGTGACGAGCCTCGAATTGATGTGTTTCAGAACCATTTACCATCTCATGGGGTGGACTAA 1566 0.4374 MVPKVYAGQEMTMVENESCIINGNWKKRVHVFGERVMRLPTKAWQTTWRVGREDPRRLIHAFKVGLSLTLVSLLYLLEPFYNSIGQSAIWAVMTVVVVLEFTAGKGNFVQRAQQRIGNTFSRIIGIYCWVYCKCIWPRALATYMRFIPYIKKNYDYGIVIFLLTFNLIAVSSYRVDNVLKIAHERVYTIAIGCAVCLLMSLLVFPNWSGEDLHNSTVYKLEGLAKSIEACVNEYFYGEIEGSGDMKLSEDPIYKGYKAVLDSKSIDETLALHASWEPRHSRYCHRFPWQQYVKVGAVLRQFGYTVVALHGCLRTEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHRHNQASNMFKIAAEQVGHGKTSLSSVKTDSSALLEWKNKRVTTEQTKESERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFIPGDEFVVTCDEPRIDVFQNHLPSHGVD* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00447 521 Pfam Aluminium activated malate transporter 48 104 IPR020966 GO:0015743
Lapu2g00447 521 Pfam Aluminium activated malate transporter 115 485 IPR020966 GO:0015743
Lapu2g00447 521 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 41 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00447 Lapu-Chr2 3736544 3739905 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00447 34 493 Miscellaneous Gene Families AT4G17970 59.533 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00447 K25841 - gmx:100819748 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00447 2 3736544 3739905 Lapu2g00447 2 3736544 3739905 ECH