Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00440 ATGATCACAAACCACGCCCGAACTCAAATTAACTCCTCCAACGGCTCTCCCTCCCTCGGCAACGCAAACTCTTCGGTCGAGGTTCAGGTGAGTGATTACGGCTTGGGACACGCGGGGGCGAATTCCGAGGCGCGTAGGAAAACTAAGATCGTCTGCACGATAGGTCCATGTACGAGCTCACGTCACATGATATGGAACCTGGCTGAAGCCGGAATGAACGTGGCGCGTTTGAACATGTCGCACGGGGACCACGCCTCGCACCTGCAGACCATTGAATTGGTGAGAGAGTACAATGCTCAGTTTCAGGATAAGGTCGTAGCCATCATGCTCGACACCAAGGGTCCAGAAGTTAGAAGTGGGGATGTGCCTCAACCAATTTCACTTAAAGAGGGGCAAGAGTTCTGTTTCACCACTACGAGAGGGGTCAGCACGGAAGATACGGTTAGCGTGAATTACGATGATTTTGTGAATGATGTGGAGGTTGGAGATGTGTTGCTGGTTGATGGAGGAATGATGTCTCTTGCTGTTAAGTCAAAGACAAAAGACTTGGTTAAATGTGAAGTTATTGATGGCGGTGAAATGAAATCTAGGCGTCATTTAAATGTCCGTGGAAAAAGTGCAACACTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGACTTCTACGCTGTCTCTTTTGTCAAGGATGCTAGAGTCGTGCACGAGTTAAAAGAGTACCTCAAAAGTCATAATGCCGATATACACGTGATTGTAAAAATTGAAAGTGCAGATTCCATACCAAATCTTCATTCCATACTTTCTGCTTCAGATGGGGCCATGGTTGCTCGTGGGGATCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATAAGGAGATGTCAAAGCATGCAAAAGCCGGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCCACGCCAACAAGGGCAGAAGTCTCAGACATTGCAATTGCAGTAAGACAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACATGGAAAATTTCCATTGAAAGCTGTTAAAGTTATGCACGCGGTGGCTCTTAGGAATGAATCCACTGTTCAAAGTGGTGTTGCTTGTCCAAGTCTGAGTTCCCATGAAAGCCACATGGGAGAAATGTTTGCTTTCCATGCGACAACAATGTCTAACACTCTTAATACCCCCATTATTGTTTTCACCAGAACTGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCTTACTCAACAATCTTTGCATTCACAAATGAAACAAGGATTAAGCAGAGATTGGCGCTTTATCATGGCGTTGTGCCCATATACATGCAATTTTCAAATGATGCAGAGGAGACTTTCTCTAGAGCCCTCAAGCTACTATTGAGTAAGGGTCATTTACAAGAGGGACAGCATGTTACTCTTGTTCAAAGTGGAGCACAACCAATCTGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAAGGTTCATGAATGA 1551 0.4513 MITNHARTQINSSNGSPSLGNANSSVEVQVSDYGLGHAGANSEARRKTKIVCTIGPCTSSRHMIWNLAEAGMNVARLNMSHGDHASHLQTIELVREYNAQFQDKVVAIMLDTKGPEVRSGDVPQPISLKEGQEFCFTTTRGVSTEDTVSVNYDDFVNDVEVGDVLLVDGGMMSLAVKSKTKDLVKCEVIDGGEMKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKEYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKFPLKAVKVMHAVALRNESTVQSGVACPSLSSHESHMGEMFAFHATTMSNTLNTPIIVFTRTGSMAILLSHYRPYSTIFAFTNETRIKQRLALYHGVVPIYMQFSNDAEETFSRALKLLLSKGHLQEGQHVTLVQSGAQPIWREESTHHIQVRKVHE* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00440 516 FunFam Pyruvate kinase 377 495 - -
Lapu2g00440 516 Pfam Pyruvate kinase, alpha/beta domain 404 494 IPR015795 -
Lapu2g00440 516 FunFam Pyruvate kinase 116 209 - -
Lapu2g00440 516 PANTHER PYRUVATE KINASE 41 492 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 Gene3D - 377 494 IPR036918 -
Lapu2g00440 516 Gene3D - 46 376 IPR040442 -
Lapu2g00440 516 ProSitePatterns Pyruvate kinase active site signature. 256 268 IPR018209 GO:0004743|GO:0006096
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 258 284 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 310 334 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 104 120 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 285 309 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 335 353 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 228 242 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 PRINTS Pyruvate kinase family signature 354 370 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 SUPERFAMILY PK C-terminal domain-like 364 514 IPR036918 -
Lapu2g00440 516 NCBIfam pyruvate kinase 46 514 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 MobiDBLite consensus disorder prediction 1 23 - -
Lapu2g00440 516 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 44 379 IPR015813 GO:0003824
Lapu2g00440 516 Gene3D - 115 210 IPR015806 GO:0004743|GO:0006096
Lapu2g00440 516 FunFam Pyruvate kinase 211 376 - -
Lapu2g00440 516 Pfam Pyruvate kinase, barrel domain 46 381 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lapu2g00440 516 SUPERFAMILY PK beta-barrel domain-like 115 206 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00440 Lapu-Chr2 3673533 3682311 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00440 K00873 - gmx:100776984 897.116