Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00410 ATGATAAACGCACTTCTATGTGAAGCAGAAATTAAGTTATCAGATGAAATGATAGAAACAATTATTAATAAGACTTTCATGGATGCTGACCCTAATCAAGATGGGAAAATAGACAAATCTGAGTGGAAAAACTTTGTTTATGAAAACCCTTCACTGTTAAAAGTTATGACGTTACCCTACTTGAGGGACGTGACAACTGTTTTTCCAAGTTTTGTATTTAATTCAAAGGTGGAGGATGAAATTGCTGAATGA 252 0.3333 MINALLCEAEIKLSDEMIETIINKTFMDADPNQDGKIDKSEWKNFVYENPSLLKVMTLPYLRDVTTVFPSFVFNSKVEDEIAE* 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00410 83 Pfam EF hand 22 46 IPR002048 GO:0005509
Lapu2g00410 83 ProSitePatterns EF-hand calcium-binding domain. 30 42 IPR018247 -
Lapu2g00410 83 PANTHER CALCINEURIN B 1 79 IPR045198 GO:0005509|GO:0019722|GO:0019900
Lapu2g00410 83 Gene3D - 1 80 - -
Lapu2g00410 83 ProSiteProfiles EF-hand calcium-binding domain profile. 17 52 IPR002048 GO:0005509
Lapu2g00410 83 SUPERFAMILY EF-hand 2 72 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00410 Lapu-Chr2 3344297 3345331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00410 1 82 EF-hand Containing Proteins AT4G17615 73.171 9.93e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00410 K06268 - gmx:100779020 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00410 2 3344297 3345331 Lapu2g00410 2 3344297 3345331 ECH
Lapu2g00410 2 3344297 3345331 Lapu3g01381 3 15456386 15461001 PCT