Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00406 ATGGTTCAATTTCACGAACACATCATCACAGAGCTTCTAGAAGATTCCAATGGCGGTCTCGTGGTTCTCTCATCCGGTCTCTCTCTCTCTAAACTCGTCTCTTCTCTCCTTCTTCTACACTCCTCATCTGAGGGAACGCTCCTTCTTCTCTCTCCTTCCTCCACTTCACTCAAATCCAAAATCACCTTCCACCTCAAAACCCTAAACCCACTATTCAACCAAATCCCCGCTGAAATCACCGCCGACCTCCCCGCGCACCACCGCCACGCGCTCTACTCCTCCGGCAATGCCTTCTTCATCACGGCGCGCATCCTAATCGTCGACCTCTTGACCAACAAGTTACCAACCTCCAAAATCGCCGGTATCCTCGTCCTCAACGCGCACTCGCTCTCCGAGACGTCCACCGAAGCGTTCATCGTTCGGATTTTCCGCTCGCTCAACCGCGGCGCGTATGTGCGCGCGTTCTCCGACAAGCCGCACGCTATGGTGTCGGGTTTCGCGAAGGCCGAGCGCACGATGAAGTGTCTACACGTGCGGAAGCTTCACCTGTGGCCGCGGTTTCAGGTCTACGTGTCGCAGGAGCTGGAGAGGGACCCCCCGGAGGTGGTGGATATAAGGGTGCCTATGAGCAAGTATATGGTGGGAATTCAGAAGGCCATTATTGAGGTCATGGATGCGTGTTTGAAAGAAATGAGGAAGACGAACAAGGTCGATGTGGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCTTTTGATGAGATTGTGAGGCGACAGTTGGATCCAATTTGGCACACTTTGGGGAAGAAGACCAAGCAGCTCGTCTCTGACCTTAAGACATTGAGGAAACTGTTGGATTATCTAGTCAGGTATGATGCGGTAACTTACTTGAAATATTTGGATACATTGAGAGTGTCGGAGAGTTTTCGGTCTGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGATTATGCAAAGAAGCGTGTTTTTCATCTTGTGAGGTCAGATGGCATGAAATTTAATGAGTTCAGTAAGGGTGTCAAAAACAAAAAGAGAAAAAGTAAGGGCGATGACAAAGACATTGAAGAAGTTGATGGTAGTTCATCCTCTACTTTGAATGGTGGCTTAGTTTTGGAGGAAGTCTTGGAAGAAGCGCCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAAGTAGAAGAGGAAAGACAAAAGACAGGTATGTTGAGGGAAGAAATACCTGCTGAGGGTGAAGACACCGACAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGGTCATGCTTGCAACTTGAAGAATGCATCACCAAAAGTCCGAAAAAGGTCATGCGTGAAGAATGGAAGAAGTACTTACTAAACAAAGTACAGCTGCGTGACATAGTGAATAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGGATTCTTGATGGAGTTACTCCCATAACACCTGCTCAGAATACAGAAACCACCAGCATTAGTAAGCAGGAACATGATGCGCTTTTGGAAGCTGCATCGAAACTAAGAAAGGCTTCTGAAAAAGACGATTTTATTAAGGATACTCCACAGCCTGATATTGGTGGACAGGGTAGTGGTAAGAGAAAGAGAAAAATGGGGATTAGAAATGTCCCAGTTGTTCTTGATGGCCCGGGAGTTCAGAACAATGATAAAGAGGAATCAGTGAGTGATAAAATTGAGATGTCTGATTCAAAAGATAAAGTCAATGAAGATGAGACTAATCCTGTCAGTGCCAGTAGATTTTCTGAAATCACGGAGGAAGGGACATCTGTGGAAAACATAGTCCTTCGGAAGCATACTAATCCTGATGTTGCAGCAAGAACTGGGAAGCCACTACCACCAGTGCATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGATATATTAAAGCCCTCCATAGTAATTGTTTACCATCCAGACATGGCCTTCGTTAGGGAAATTGAAATCTACAAATCTGAGAATTCCTCAAAAAGGTTGAAAGTGTATTTTCTTTTCTATGAAGATTCAACCGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATTAGACAAAAATCTATGATGATGATTCCAGTTGACCAGAGTGGGCACTGTTTAGGATTGAATTATACTTTCGAATCAGATTTAAATACTCCTCAAAACTCAGTAACCAGAAAAGCAGGAGGGAGAAAGGAGGCTGACAAAGAAATGCAGGTTATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAACGTTCTTCATCAGAAGGGAATGCGCATTATTCCTGTGACCCTAGAAGTTGGTGACTATATCCTATCACCTTTAATCTGTGTGGAAAGAAAAAGTATTCAAGATCTTTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTCGAGACAATGGTACGATATTACAAAATACCTGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTCCAGTCTGCTAGTGATATTGGCGATGATGTGACGCCAAATAGCATTATATCAAAGTTGTCTCTGCTTGCTCTACACTTCCCCAGGCTACGGATAATCTGGTCTCGAAGTTTGCATGCTACTGCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAGCCAGATGAAACGAAAGCAATCAGAGTGGGCGTTCCCTCAGAAGAAGGCATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACATCGGCCGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGACTCAAACTACAGGGCCATAATGGATGGGTGTAAGAGCTTCGCAGAACTTGCACTTCTTCCTGTGGAGAGGCTAGCGGAATTAATGGGTGGCCATAAAGCTGCTCGGACTCTCAGAGACTTTCTAGATGCTAAATACCCAACTTTGTTGTGA 2961 0.4458 MVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLLLHSSSEGTLLLLSPSSTSLKSKITFHLKTLNPLFNQIPAEITADLPAHHRHALYSSGNAFFITARILIVDLLTNKLPTSKIAGILVLNAHSLSETSTEAFIVRIFRSLNRGAYVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHLWPRFQVYVSQELERDPPEVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGMKFNEFSKGVKNKKRKSKGDDKDIEEVDGSSSSTLNGGLVLEEVLEEAPKWKVLREVLEEVEEERQKTGMLREEIPAEGEDTDNGIVLVACKDERSCLQLEECITKSPKKVMREEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPITPAQNTETTSISKQEHDALLEAASKLRKASEKDDFIKDTPQPDIGGQGSGKRKRKMGIRNVPVVLDGPGVQNNDKEESVSDKIEMSDSKDKVNEDETNPVSASRFSEITEEGTSVENIVLRKHTNPDVAARTGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMAFVREIEIYKSENSSKRLKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHCLGLNYTFESDLNTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYKIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSFAELALLPVERLAELMGGHKAARTLRDFLDAKYPTLL* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00406 986 PANTHER DNA REPAIR ENDONUCLEASE XPF 1 985 - -
Lapu2g00406 986 MobiDBLite consensus disorder prediction 471 490 - -
Lapu2g00406 986 SUPERFAMILY Restriction endonuclease-like 752 890 IPR011335 -
Lapu2g00406 986 SMART ERCC4_2 755 835 IPR006166 GO:0003677|GO:0004518
Lapu2g00406 986 Pfam ERCC4 domain 758 887 IPR006166 GO:0003677|GO:0004518
Lapu2g00406 986 SUPERFAMILY RuvA domain 2-like 917 981 IPR010994 -
Lapu2g00406 986 CDD XPF_nuclease_XPF_euk 755 889 IPR047520 -
Lapu2g00406 986 Gene3D - 755 902 - -
Lapu2g00406 986 FunFam DNA repair endonuclease XPF 755 899 - -
Lapu2g00406 986 MobiDBLite consensus disorder prediction 566 588 - -
Lapu2g00406 986 MobiDBLite consensus disorder prediction 521 594 - -
Lapu2g00406 986 Gene3D - 913 984 - -
Lapu2g00406 986 MobiDBLite consensus disorder prediction 350 371 - -
Lapu2g00406 986 FunFam DNA repair endonuclease UVH1 913 985 - -
Lapu2g00406 986 MobiDBLite consensus disorder prediction 350 366 - -
Lapu2g00406 986 Coils Coil 392 412 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00406 K10848 - gmx:100812359 1647.87