Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00399 ATGTCCGCCTCTCAACTCATCTCCGTCAGTCCCGACGAACTCCGCTTCCATTTCGTGTACCCAGTTGAGTTGGAGAAGCAAACCTTTTGCGATCTTAAGGTCCTCAATAACACAGAGAATCATGTTGCTTTCAAGGTCAAAACCACTTCTCCCAAGAAATACTTTGTACGACCAAACACCGGTGTCGTACACCCCTGGGACTCCTGTATCATCAGAGTCACCCTCCAAGCCCAACGGGAATACCCTCCGGACATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACAATAGTGAATCCAAATACTGATGTTGACGATCTCCCACAGGATACTTTTAATAAGGAAAGTGGTAATTCAATAGAGGAGTTGAAATTAAGAGTTGCATATATCACTACTGCCTCACCCGAAGGAAGCTCAGAAGATGATGCATCAAAGAACTCACATCAACTCGATACCTCTTCTAGTCAGGCTTTACAGAATCTGAAGGAAGAAAGAGAAGCCGCTGCCAGACAAACGAGACAACTGCAACAGGAACTGGACATGCTGAAAAGACGAAGAAACCGAAAAAGTGATCCTGGCTTTTCCTTCATCTTCGCCATTTTTGTGGGTCTCCTTGGAGTTTTACTTGGCTTTCTTTTGAAACTTTTATTCTCTTCTCCATCTAGAGAATGA 672 0.4375 MSASQLISVSPDELRFHFVYPVELEKQTFCDLKVLNNTENHVAFKVKTTSPKKYFVRPNTGVVHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVNPNTDVDDLPQDTFNKESGNSIEELKLRVAYITTASPEGSSEDDASKNSHQLDTSSSQALQNLKEEREAAARQTRQLQQELDMLKRRRNRKSDPGFSFIFAIFVGLLGVLLGFLLKLLFSSPSRE* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00399 223 MobiDBLite consensus disorder prediction 135 173 - -
Lapu2g00399 223 FunFam Vesicle-associated protein 1-1 1 133 - -
Lapu2g00399 223 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 130 IPR000535 -
Lapu2g00399 223 Gene3D Immunoglobulins 1 132 IPR013783 -
Lapu2g00399 223 PIRSF VAMP_assoc_prot 133 215 IPR016763 GO:0005789
Lapu2g00399 223 PIRSF VAMP_assoc_prot 1 160 IPR016763 GO:0005789
Lapu2g00399 223 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 212 IPR016763 GO:0005789
Lapu2g00399 223 SUPERFAMILY PapD-like 2 138 IPR008962 -
Lapu2g00399 223 Coils Coil 158 185 - -
Lapu2g00399 223 Pfam MSP (Major sperm protein) domain 18 114 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00399 Lapu-Chr2 3262359 3266725 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00399 - - gmx:100794270 363.614