Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00394 ATGGCTACAACAACCTCGTCCTTTGTCTTCCTGAAATCTCACGCCTCACCGTTTTGTCTCACCAAAACGTTGTTCACCAACATTGATGGGTTTGGACATGGAATTGGAACCCGCAGAAGTTACAAAGTCATCAAGGCTCAGTCTCAATCTGATGTACGAAAGGAACAAGTTGTGATTGTGGGTGCTGGGATCGCAGGCCTTGCAACTGCTCTCTCCCTTCACAGGCTTGGAGTTCGGTCCCTGGTGCTGGAGCAGGCAGAGTCACTTCGAACCGGTGGAACCTCACTCACCCTTTTCAAAAACGGATGGAGGGTACTCGATGCAATTGGAGTAGCTAATGATCTCAGAACTCAGTTCTTAGAAATTCAAGGGATGGTGGTGAAGTCCGAGGATGGGAGGGAACTACGCGCCTTCAATTTCAAGCAAGAGGACGAAAGTCAAGAGGTACGTGCAGTGGAGAGAAGAGTGCTTTTAGAAACCTTGGCCAGTCAGCTACCACGGGATACCATTCAATATTCTTCACAATTAGCAAGGATTGAAGCCACTCCAAACGGGGATACCCTGTTGGAACTTGTGGATGGGTCTAAGCTGCTTGCAAAGACTGTGGTAGGGTGCGATGGAATTCGATCACCAATAGCTAAGTGGATGGGGTTTCCTGAGCCCAAGTACGTCGGTCACTGTGCTTTCCGTGGACTTGCGTCTTATTCAGATGGACAACCTTTTGGACCAAGAGTGAATTATATCTACGGAAGAGGGTTGCGCGCTGGCTTTGTTCCTGTTTCTCCAACCAAAGTTTACTGGTTCATCTGCTTCAATAGTCCTTCTCCAGGTCCAAAAATAACAGACTCCTCGGTGCTGAAGAACCAAGCTAAGGAACTAGTGAAGGATTGGCCGTCAGAGCTATTGAACATAGTGGATTCTACGCCAGATGATACTGTGATCAAGACTCCATTGGTAGATAGGTGGCTTTGGCCAGCCATAAGTCCAGGTGCTTCTGCAGGAAGAGTGGTGGTGGTTGGAGATGCATGGCATCCAATGACTCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTGGAAGATTCAGTGGTTCTTGCTAAGAAGCTTGCCAGAGCAATAAAGTCTGAAGACCCATCTGTGGAAGAAGCTTTCAGGTCCTATGGCACCGAAAGATGGCCCCGTGTATTTCCACTGACCATACGCGCAAACCTTGTGGGTTCCGTTTTGCAGTGGGAGAACCCAGTCGTGTGTTCTGTTAGGAACAACATTGTCATACCTAAGCTAGTCAGGCTCGGGCCATTACTGGAGCATACAAATTTTACTTGCGAGAGTCTGTAA 1335 0.4831 MATTTSSFVFLKSHASPFCLTKTLFTNIDGFGHGIGTRRSYKVIKAQSQSDVRKEQVVIVGAGIAGLATALSLHRLGVRSLVLEQAESLRTGGTSLTLFKNGWRVLDAIGVANDLRTQFLEIQGMVVKSEDGRELRAFNFKQEDESQEVRAVERRVLLETLASQLPRDTIQYSSQLARIEATPNGDTLLELVDGSKLLAKTVVGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSPGPKITDSSVLKNQAKELVKDWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPGASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAIKSEDPSVEEAFRSYGTERWPRVFPLTIRANLVGSVLQWENPVVCSVRNNIVIPKLVRLGPLLEHTNFTCESL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00394 444 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 55 443 IPR044560 -
Lapu2g00394 444 Gene3D - 55 424 IPR036188 -
Lapu2g00394 444 Pfam FAD binding domain 56 393 IPR002938 GO:0071949
Lapu2g00394 444 SUPERFAMILY FAD/NAD(P)-binding domain 56 422 IPR036188 -
Lapu2g00394 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 56 78 - -
Lapu2g00394 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 348 - -
Lapu2g00394 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 348 364 - -
Lapu2g00394 444 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 198 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00394 Lapu-Chr2 3240349 3242581 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu2g00394 55 444 Miscellaneous Gene Families AT5G05320 35.323 8.04e-81 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00394 - - gmx:100787671 798.119