Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00346 ATGAGCACCGGCGACCTTCTCAACATCGACCCTCTCGAGCTTAAGTTCTTCTTTGAGCTCAAGAAGCAGATCTCCTGTTCTCTTCAATTGTCGAATAAGACCGATAGCTATGTAGCTTTCAAGGTTAAAACCACCAATCCGAAGAAGTACTGTGTTCGTCCAAACACTGGAATTGTCTTGCCGCGATCTACATGCGATGTCATCGTTACCATGCAAGCGCAAAAGGAAGCTCCGTCTGATATGCAATGCAAGGATAAATTTCTTCTTCAAAGCGTAAAAGTAGAGGATGGAATCGCCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGTTGTATGTCTCTCCGCCTCAACCTCCGTCACCAGTCCCAGAAGGTTCCGAGGAAGGATCATCACCTAGAGGTTCTGTTTCCGACAATGGAAATGTCAGTGGTGCTGACTCCGCAGCTGTAACAAGAGCATTTGCTGAACGACATGATGGTCCAGAAAAGTCTGCAGAGGCAAAAGCTCTTATCTCAAGACTGACAGAAGAAAAGAACAATGCAATTCAACATAATAACAAGCTTCGTCAGGAACTGGACATGCTGAGACGGGAAAGCAACAAAAGTCGTGGGGGTGTCTCGATGGTGATTGTCATATTAATTGGTTTACTTGGCATAATTATGGGGTATCTCATGAAGAAGACCTAA 726 0.4518 MSTGDLLNIDPLELKFFFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPSDMQCKDKFLLQSVKVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNVSGADSAAVTRAFAERHDGPEKSAEAKALISRLTEEKNNAIQHNNKLRQELDMLRRESNKSRGGVSMVIVILIGLLGIIMGYLMKKT* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00346 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
Lapu2g00346 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Lapu2g00346 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Lapu2g00346 241 Coils Coil 184 211 - -
Lapu2g00346 241 MobiDBLite consensus disorder prediction 143 157 - -
Lapu2g00346 241 MobiDBLite consensus disorder prediction 127 157 - -
Lapu2g00346 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Lapu2g00346 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Lapu2g00346 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Lapu2g00346 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00346 Lapu-Chr2 2870492 2876033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00346 - - gmx:100791280 379.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00346 2 2870492 2876033 Lapu2g00346 2 2870492 2876033 ECH