Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu2g00338 ATGCCAATAAAATCCATTATGTCCAGCGCAGCCCCGCTTCTCGCGTCGCGCCATGTGGCAGTTATTGGCGCCGGCGCAACCGGTCTTGTGGCGGCTCGCGAGCTCCGGCGTGAGGGCCACCGGGTGGTGGTTTTCGAGCGAGGTGACGAAGTGGGAGGCACGTGGGTGTACACTCCGGAGGTGGAATCAGATCCGGTAGGTTTGGACCCGAACCGGAGGATAGTCCACTCGAGCCTCTACAATTCGCTCCGAACCAATCTGCCTCGCGAGAGCATGGGTTTCCGAGATTACCCTTTCAGGAAGAGGGAGGAGAAAGGGAGGGATTCTAGAAGGTTCCCAGGTCACAGAGAGGTGTTGATGTATTTGCAAGATTTCGCCAATCATTTTGAAATCCATGAATTGGTGCGGTTTGGGACGGAAGTGGTGTTCGCTGGAGTGGATGAGTGTGGAAAATGGAGGGTGACGTCAACGTCACCGAAGAGTGATCCTGTGGACGAGATTTACGACGCCATTATCGTTTGCAATGGACATTATGTTCAGCCTCGTCTTCCTCATATCCCTGGCATTAGTGCGTGGCCAGGGAAGCAGATGCATAGTCATAATTATAGAACACCTGAGCCCTATCAAGATAAAGTAGTAGTTCTAATTGGTGGCTCGTCGAGTGCGGTTGATATCTCTCGAGATATCGCAACAGTTGCTAAAGAAGTCCACATTGCAGTTAGGTCTCTTGAAGAAAATAAGCTAGGAAAGGTGCCTGGCCATCAAAACATGTGGTTTCATTCTATGATTGACAGTGTTCACGAAGATGGTACAGTGGTTTTTCAGGATGAAAGTGCAGTTGGTGCTGACTTCATCATACACTGCACAGGATATAAGTATGATTTCCCTTTCCTTGAAACCAACGGGGAGGTGACCGTTGATGACAACCGTGTAGGACCACTCTACAAGCATGTTTTTCCACCAGCGTTGGCTCCATGGCTTTCATTTGTTGGGTTGCCTTGGAAGGTTGCTCCCTTCCCCATGTTCGAGCTGCAGAGCAAGTGGATAGCTGGAGTTTTGTCTAATCGCATTGCACTTCCTTCAAAAGAGGAGATGGCTGAAGACATTAAAGCTTTTTACACATCACTTGAAGCCTCTGGCACACCTAAGCGTTACACTCATAATATGGCCGTTCTTCAGTGGGAGTACAATGATTGGATTGCGGATCAGTGTGGATTTCCTTATTCTGAAGAATGGAGAAAGCAAATGTACATGGCCACATCCAAGAACAGGGTCTTGCGACCCGAGTCTTACCGTGACGAGTGGGAGGACGATGATTTGGTTCTACAAGCTCAAAAGGATTTTGACAATTATCTGATCTAA 1362 0.4883 MPIKSIMSSAAPLLASRHVAVIGAGATGLVAARELRREGHRVVVFERGDEVGGTWVYTPEVESDPVGLDPNRRIVHSSLYNSLRTNLPRESMGFRDYPFRKREEKGRDSRRFPGHREVLMYLQDFANHFEIHELVRFGTEVVFAGVDECGKWRVTSTSPKSDPVDEIYDAIIVCNGHYVQPRLPHIPGISAWPGKQMHSHNYRTPEPYQDKVVVLIGGSSSAVDISRDIATVAKEVHIAVRSLEENKLGKVPGHQNMWFHSMIDSVHEDGTVVFQDESAVGADFIIHCTGYKYDFPFLETNGEVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKVAPFPMFELQSKWIAGVLSNRIALPSKEEMAEDIKAFYTSLEASGTPKRYTHNMAVLQWEYNDWIADQCGFPYSEEWRKQMYMATSKNRVLRPESYRDEWEDDDLVLQAQKDFDNYLI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu2g00338 453 Pfam Flavin-binding monooxygenase-like 263 372 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lapu2g00338 453 Pfam Flavin-binding monooxygenase-like 17 242 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 197 211 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 PRINTS Flavin-containing monooxygenase (FMO) signature 224 239 IPR000960 GO:0050660|GO:0050661
Lapu2g00338 453 SUPERFAMILY FAD/NAD(P)-binding domain 17 242 IPR036188 -
Lapu2g00338 453 Gene3D - 19 433 IPR036188 -
Lapu2g00338 453 Gene3D - 185 288 IPR036188 -
Lapu2g00338 453 PANTHER DIMETHYLANILINE MONOOXYGENASE 17 438 - -
Lapu2g00338 453 FunFam Flavin-containing monooxygenase 185 288 - -
Lapu2g00338 453 SUPERFAMILY FAD/NAD(P)-binding domain 258 439 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu2g00338 Lapu-Chr2 2771990 2777071 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu2g00338 - - gmx:100793203 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu2g00338 2 2771990 2777071 Lapu2g00338 2 2771990 2777071 ECH