Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02198 ATGGATGTTGCTTCCTACTCTCTGCTTTTCATGTGCCTTCTTCAATCGGTGATAGGAATATTAGACCCCAACGATTTCCTCGCTCTTCAATCCATTCGGAAATCGCTTCACGATGTTCCCGGTTCAAATTTCTTCTCCTCCTGGGACTTCACCGCCGACCCCTGCAACTTCGCCGGCGTTTACTGCGCCAACGATAAAGTCGTCGCGCTCAACCTCGGCGACCCCAGGGCCGGTTCGCCCGGTCTCACCGGAAAACTAGACCATTCCATTTCCAAGCTATCTGCTCTCGCCGACCTCACCGTCGTCCCCGGTAGAATATACGGTCCTCTCCCTCAATCTCTCTCCCAATTAAAAAACCTCCGGTTCCTCGGCGTCAGCCGGAATTTCATCTCCGGCGAGATTCCGGCTGGTTTAGGTCAGCTTCGCAGTATTAGAACCATCGATCTCAGTTACAACCAGCTCACCGGAACAATTCCTCCGTCCATCGGAACCTTACCGCAGCTAACCAACCTTATGCTCTGCCACAACCGCCTCTCCGGTTCAGTTCCCTCGTTCGCCTCGGCTTATTCCCTAACCCGGCTCGAACTGAAGCACAACACTCTCTCCGGTTCCCTCGCACCGTACTCTCTCCCTCCCTCCCTACAGTACCTCTCTCTATCATGGAACAAACTAACTGGACCCGTGGACCGCCTCCTAACCCGCCTCAACCGGCTTAACTTCTTGGATCTTAGCTTGAACCAGTTCACAGGCCCAATACCGGCCCAAATATTCTCATTCCCCCTCACAAATCTACAACTGGAAAGAAACCAATTCTCCGGCCCGGTCCGACCGGTGAATGAGGTGACGATCCAGACCGTTGATCTCAGCTACAATAGGTTATCCGGTGAGGTGTCGCCCATGCTAGCGAGCGTGCAGAACCTGTACCTGAACAACAATGGGTTCACGGGGCAGGTTCCGGGCAGCTTCGTGGAGCGGTTACTGGCCGCGGGCATTCAGATACTGTATCTGCAGCACAATTTTCTGACCGGAATTGCAATAAGCCCAACTGCGGAGATTCCGGTGAGCAGCACCCTGTGTTTGCAGTATAACTGCATGGTGCCACCGGTTCAGACGGCGTGCCCCTTCAACGCCGGGAAGCGGAAAATCAGGCCAGCTCAGCAGTGTAACCGCCGCTAA 1176 0.5442 MDVASYSLLFMCLLQSVIGILDPNDFLALQSIRKSLHDVPGSNFFSSWDFTADPCNFAGVYCANDKVVALNLGDPRAGSPGLTGKLDHSISKLSALADLTVVPGRIYGPLPQSLSQLKNLRFLGVSRNFISGEIPAGLGQLRSIRTIDLSYNQLTGTIPPSIGTLPQLTNLMLCHNRLSGSVPSFASAYSLTRLELKHNTLSGSLAPYSLPPSLQYLSLSWNKLTGPVDRLLTRLNRLNFLDLSLNQFTGPIPAQIFSFPLTNLQLERNQFSGPVRPVNEVTIQTVDLSYNRLSGEVSPMLASVQNLYLNNNGFTGQVPGSFVERLLAAGIQILYLQHNFLTGIAISPTAEIPVSSTLCLQYNCMVPPVQTACPFNAGKRKIRPAQQCNRR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02198 391 SUPERFAMILY L domain-like 31 365 - -
Lapu1g02198 391 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Lapu1g02198 391 Pfam Leucine Rich repeat 212 226 IPR001611 GO:0005515
Lapu1g02198 391 Pfam Leucine Rich Repeat 144 163 IPR001611 GO:0005515
Lapu1g02198 391 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 17 389 - -
Lapu1g02198 391 Gene3D Ribonuclease Inhibitor 188 379 IPR032675 -
Lapu1g02198 391 FunFam Nuclear pore complex protein NUP107 23 184 - -
Lapu1g02198 391 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02198 Lapu-Chr1 36576039 36577555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02198 25 369 Receptor kinase-like Gene Family AT3G51740 33.333 4.09e-36 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02198 - - gmx:100817314 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02198 1 36576039 36577555 Lapu1g02198 1 36576039 36577555 ECH
Lapu1g02198 1 36576039 36577555 Lapu7g00652 7 7527960 7529856 PCT