Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02197 ATGAAGAAAGGAAAGGGCAAGAACAGCGGCTTGTTGCCCAATTCGCTGAGGATTATCTCTCTCTGCCTAAAGACTGTGTCAACGAATGCCACTACCGTTGCTTCCACCGTCCGCTCCGCCGGCGCCTCTGTCGCCGCTTCTATTTCCTCTTCTTCTGAGGATCACAAAGATCAGGTAACCTGGGCTGGTTTTGATACACTGGAGCTTGATCCATCAAACTTCAAACGCGTTCTTTTACTTGGTTATCTGAATGGATTTCAAGTTCTTGATGTGGATGATGCCTCTGGCTTCAGTGAACTGGTCTCAAAGCGTGATGGTCCAGTTTCCTTTCTACAGATGCAGCCCTTCCCTATCAGTGGTGATGGCCAGGAGGGATTCAGAAAGTCGCACCCTTTACTGTTGGTTGTTTCTGGGGGTGATAGTAGCAGTGTAAACCAGAGCGGTACTTGTTTGAGTGATTTAGAAAGAGATGATAATGTTGAGATGCATTCTGGGAACGATGTCTACTCTTCAACAACTGTTCGGTTTTACTCCTTGAAGTCTCACTGTTATGTTCATGTTCTGAGGTTCCGTTCCACGGTGTGTATGATCAGATGCAGTCCACGGATAGTAGCAGTTGGTCTTGCCACCCAAATACACTGCTTTGATGCTGTAACTCTTCAGATTAAGTTCAGTGTTCTCACTTATCCTGTTCCTCAGTTAGCTGGACAAGGAACAACTAGTGTTAATGTTGGTTATGGTCCGATGTCTGTGGGTCCAAGGTGGTTGGCATATGCTTCTAACACCCCCCTTCCCTCTAATTTAGGTTGCCTAAGCCCTCAAAACTTCAGTTCTTCATCGGGCACTAGTCCATCAACTACTCCAAGTAATGGTAGTTTAGTGGCTCGTTATGCAGTGGAATCCAGTAGACATTTAGCTGCTGGAATAGTCAAATACTGTCAAGAGCTGCTTCCGGATGGCTCCTCTTCACCCATGCCATCAAATTTAGGTGTGAAAGTCAATAGGGTTACAGGAATTGATGCAGATAATGTGGGCATGGTAGCTGTTAGGGACTTTGTTTCCGAAATTATCATATCACAATTCAAAGCTCACAGTAGTCCTATTTCTGCACTATGTTTTGATCCTAGTGGGACCCTTCTGGTTACTGCATCGGTCTATGGGAATAACATGAATATATTTCGTATAATGCCATCATTCACATGCAAGAGTTCAGGAATTCCGAGCTCAAATTGGAGCTCTTCTCATGTGCATCTTTACAAACTTCACCGTGGAATAACACCAGCTATGATTCAAGACATCTGTTTCAGTAATTTTAGTCAGTGGATTGCTATTGTCTCATCCAAGGGTACATGTCATCTCTTCATTTTATCACCCTTTGGGGGTGATACTGGTTTTCGAATTATTAGTTCTCAGGGTGAAGAACCGTCCCTACTTCCAGTCTTACCTCTACCTTGGTGGTATACTCCGGGTTCTATTTCTTATCAGCAATCTTTGCCTCCCCCTGCACCTGTTGTCCTTTCTGTGGCTAGCCGGATAAAATATAGTAGTTTTGGATGGCTTAATACTGTTCACAATTCTGCTGCAAATTTTACAGGGAAAGTTTTTGTTCCATCTGGTGCTATTGCTGCCATCTTTCATAATTCCTTATCTCACTCGCTGCTGCCTGTTAACTCAAAAGCAAACCCCTTAGAGCATATATTGGTATATACACCTTCAGGTCATGTTGTTCAACATGAACTTCTGCCATCTGTTGGTTCAGAAACAAGTGACAGTAGTTTGAGAAACCAGTCGACTTCACTCCTGCATGTGCAGGAGGATGAGTTCAGAGTCAAAGTTGAACCTATTCAATGGTGGGATGTTTGTAGAAGGTCAGAATGGCCAGAAAGAGGGGATACTTGCATCAATACCTTTGATAGACAAGGAGGTGTTGAGAGAGTTCAAGAGAAAATAGGCTATAGTGATGTCCATGGATTGGATTTTTTGGGTATTAGTGATGGGGCAGGGGAAAAGATGGTGAAACCTTCTAGGGAAAATACACAAGAGAGGTTTCATTGGTATCTGTCAAATGCGGAGGTGCAAGGGAATTTTGGAAGGTTACCAGTATGGAAAAAGTCTAAGATTTGTTTCTATTCAATGAGTTCTGTGGGAGCTAGTTTCAGTGCTACTGGGGAGTTTGAGATTGAAAGTGTCCCTGCTAATGAAGTTGAAATAAGGCGGAAGGAGCTGTTGCCTGTTTTCAACCATTTTCATAGCATCAGATCAAGCTGGAATGAGAGAGACCTGGATGGGGAAAGATATTTAAGCCTTTCATCTCCTGTTCCCAATCAAGGTGATTTTAAGGAGACTGCTGATGTGACAGTTATTTGTCATTCAAAGCCAGCATCTCTGAGTTCCACAGAAAGCTCTGATGGAGGTTCATCAAGAAGAATTGAAAATCTGCTTGACTTGGATCAAGTTGCTTCTAGTTATCAAATACATGGTGAGATATGTCTGGAAAGAATTGGGACAAGCAATGTTGAGCCTTCTCTGCAAAACCAGATTGTGATGGAAAGTCCATCACGTGTGTTTGGAAACTCAAAACATGTCGATTTTAATGCTGACCTTATTGGCAGTCCTATATTCCAGATGAGAAATATAACTTCTGATGGAAGAGATTCTATAGATTTTGGGATCAATGAGAACTCGGCATTGGTCCTGGAACATTCTTCACACGAGACTGAATTTGTGGAAGTAGCCTGGGCAAAGCAAGATGAAAGTTTAACAGATGGGCACTGCAAAACACAGGAGCATGATGGAAGTGACCTGTTAACTGAAGTTGTAACTGATGATGTTGACAGCAGCAGTAGCCACCATGAAAAAGAGCAACTGGAGGGGGATGAGGAGAATGATGAAATGCTTGGTGGTATATTTTCCTTTTCTGAAGAAGGTAAAATATAA 2937 0.4287 MKKGKGKNSGLLPNSLRIISLCLKTVSTNATTVASTVRSAGASVAASISSSSEDHKDQVTWAGFDTLELDPSNFKRVLLLGYLNGFQVLDVDDASGFSELVSKRDGPVSFLQMQPFPISGDGQEGFRKSHPLLLVVSGGDSSSVNQSGTCLSDLERDDNVEMHSGNDVYSSTTVRFYSLKSHCYVHVLRFRSTVCMIRCSPRIVAVGLATQIHCFDAVTLQIKFSVLTYPVPQLAGQGTTSVNVGYGPMSVGPRWLAYASNTPLPSNLGCLSPQNFSSSSGTSPSTTPSNGSLVARYAVESSRHLAAGIVKYCQELLPDGSSSPMPSNLGVKVNRVTGIDADNVGMVAVRDFVSEIIISQFKAHSSPISALCFDPSGTLLVTASVYGNNMNIFRIMPSFTCKSSGIPSSNWSSSHVHLYKLHRGITPAMIQDICFSNFSQWIAIVSSKGTCHLFILSPFGGDTGFRIISSQGEEPSLLPVLPLPWWYTPGSISYQQSLPPPAPVVLSVASRIKYSSFGWLNTVHNSAANFTGKVFVPSGAIAAIFHNSLSHSLLPVNSKANPLEHILVYTPSGHVVQHELLPSVGSETSDSSLRNQSTSLLHVQEDEFRVKVEPIQWWDVCRRSEWPERGDTCINTFDRQGGVERVQEKIGYSDVHGLDFLGISDGAGEKMVKPSRENTQERFHWYLSNAEVQGNFGRLPVWKKSKICFYSMSSVGASFSATGEFEIESVPANEVEIRRKELLPVFNHFHSIRSSWNERDLDGERYLSLSSPVPNQGDFKETADVTVICHSKPASLSSTESSDGGSSRRIENLLDLDQVASSYQIHGEICLERIGTSNVEPSLQNQIVMESPSRVFGNSKHVDFNADLIGSPIFQMRNITSDGRDSIDFGINENSALVLEHSSHETEFVEVAWAKQDESLTDGHCKTQEHDGSDLLTEVVTDDVDSSSSHHEKEQLEGDEENDEMLGGIFSFSEEGKI* 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02197 978 Gene3D - 326 480 IPR015943 GO:0005515
Lapu1g02197 978 Pfam Breast carcinoma amplified sequence 3 501 744 IPR022175 -
Lapu1g02197 978 MobiDBLite consensus disorder prediction 941 978 - -
Lapu1g02197 978 SUPERFAMILY WD40 repeat-like 166 454 IPR036322 GO:0005515
Lapu1g02197 978 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 2 958 IPR045142 GO:0006914
Lapu1g02197 978 SMART WD40_4 354 394 IPR001680 GO:0005515
Lapu1g02197 978 SMART WD40_4 412 455 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02197 Lapu-Chr1 36553792 36560585 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02197 - - gmx:100785780 1563.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02197 1 36553792 36560585 Lapu1g02197 1 36553792 36560585 ECH