Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02191 ATGATGACAGACGATCAACTCGTACAGAAACTTGAAGAATTAACCATCAACGCTCAACATCACCAGTTGGAGACTCTTCGTTCGATCCTTCTTCACAATGGCTCTGTGCGCTATCTTCAACCCTTCAAGAAGGGTCCTCTTCCTCTTGATCACTCCACTTTCACACGTCTCGTGCCTCTCTCTTCCTATGAAGACTACGTTGACCACATTAACCACATGGCAGATGGGAAAGATGACCCCTTTCTCTCCGTTGACCCTCTCCGTTGCTTCTTTTACAGGCTATTCCCTCCTAGACCTGAAGTGAACAAGATGTTATGGTTTCTCTATGCTGACAATATGACTACTACTAAATGTGGCTTGAAAGTCATGGCTGCTTCCACATACCCTTTGCAAAGTGGTAATGCTACCCCTCAGCAACTTGCTACCTTTTCCAGTCCCCTGGAAGTGATTCTAGGATCTCATGTTGAGCATCAAATGTACTGCCACCTTCTATGTGGCCTGAGGAATCTTGATGTTATAGATGGAATAACAACCCCTTATGCCATAGGATTGATCAAGGCATTCGGTCTCCTTGAGTCCAAGTGGGGGCAACTATGTGATGATCTTGACCATGGATTTCCGTGTGATGAAATTTCTGAGGGGGCAATGAGGGAAGCTGTAACTAAGACACTTGGTGGACCTCAGCCAGAATTGGCAAATAGAATAAGGTTAATCTGTGAAGGTAACAACTGGGGTGGAATAGTGTATAGATTGTGGCCAAACACTCGTTATATCAGGTGTGTTACCACTGGAAGCATGAAGCAATACTACCAAAAGCTCAAGTACTATGCTGGAGAGGTACCTATTTTAGGAGGAGATTACTTTGCTTCAGAATGCTGTGTTGGTTTAAATTTGGACATAATGCAACCCCCTGAGACAACACGGTTTGTGATACTTCCAACTTTTGCCTACTTTGAGTTTCTTCCATTTAACACGAATGAGGATCATGTTAGCAAAGAAACAGTGGACCTTTGCGGTGTGGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTACAGAGGATTTTATCGCTACCGTTTGGGCGATATAGTGAGAGTTGTTGGTTTCCATAACTCATCTCCAGAAGTAGAGTATGTGATGAGAGCACCTAAAACTCCTGCTGAGATTGTGACTGAGAAGGACGTTATTTCAGCAGTTGAAAATTTTCAACTTGCACTTAGAGATGTTACGAAAATTGAGATTGTTGAGTATGCAAGTTTCTTGGACCAGGAGTCAATGCCTAAGCAGTTGAAGGTATTTGTGGAAGTCCAAGAGGAATCTAATTTCCTCGAGGATAAGCTCGAGGAATCAGTTAAAGTTTTTAGAAGTTGTTTGTTCGCTCTCGAGAGTGGATTGGGAGCTATATACAAGGTGCAGAGGGATAAAGGTCAACTAAGAAGCTTACTGTTATTCATCATAAGGCCTGGAGCTTTTGATCAATTATCAGAATTAGCCCTTCAGAATGGAACATCAGCTAGTCAATATAAACCACCCAAGATTATAAGGAACCATGAAGTTGTCAAACTCTTGGAAAATTTGGCCATTGTGACAGTATCCTTTGATGGTTAA 1611 0.4246 MMTDDQLVQKLEELTINAQHHQLETLRSILLHNGSVRYLQPFKKGPLPLDHSTFTRLVPLSSYEDYVDHINHMADGKDDPFLSVDPLRCFFYRLFPPRPEVNKMLWFLYADNMTTTKCGLKVMAASTYPLQSGNATPQQLATFSSPLEVILGSHVEHQMYCHLLCGLRNLDVIDGITTPYAIGLIKAFGLLESKWGQLCDDLDHGFPCDEISEGAMREAVTKTLGGPQPELANRIRLICEGNNWGGIVYRLWPNTRYIRCVTTGSMKQYYQKLKYYAGEVPILGGDYFASECCVGLNLDIMQPPETTRFVILPTFAYFEFLPFNTNEDHVSKETVDLCGVEVGKMYEVVVTTYRGFYRYRLGDIVRVVGFHNSSPEVEYVMRAPKTPAEIVTEKDVISAVENFQLALRDVTKIEIVEYASFLDQESMPKQLKVFVEVQEESNFLEDKLEESVKVFRSCLFALESGLGAIYKVQRDKGQLRSLLLFIIRPGAFDQLSELALQNGTSASQYKPPKIIRNHEVVKLLENLAIVTVSFDG* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02191 536 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 5 91 IPR004993 -
Lapu1g02191 536 Pfam GH3 auxin-responsive promoter 101 518 IPR004993 -
Lapu1g02191 536 Pfam GH3 auxin-responsive promoter 10 91 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02191 Lapu-Chr1 36488184 36490869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02191 11 531 EF-hand Containing Proteins AT1G23160 31.041 2.10e-88 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02191 K14487 - gmx:100786829 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02191 1 36488184 36490869 Lapu1g02191 1 36488184 36490869 ECH