Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02186 ATGGCGGCTGTCCCAGCATCGCGGACCGATCCTCCGGCAATGGTGTCGCCGCCGGTCCTCGTCTCCGACTCCTTCGCCAAGGACGCCATTCTCGCCTGGTTTCGGGGCGAGTTCGCGGCGGCCAACGCCATAATCGACGCGCTCTGCGGCCACCTCGCGCACCTCGCTACCGCCTCCTCCGACTACGAAGCCACCTTCGCCGCTATCCACCGCCGCCGCATCAACTGGATCCCCATCATCCAGATGCAGAAATACCACTCCGTCGCTGATGTCGCTCTCGAGCTCCGCAGAGTCGCCGACAGGAAAACAGAGGCAGGCGCCAGGAAGAGCGAGACTAGCTTCGACGAGGAACGGAAATTGGAGAAGGAAACGGTGGAAACTGGTGAAAATGAGGGTGACGAAGCTGCGCCGGAGTATGATTCGCCGGACAGTGAAATAACTGATTCAGGATCTCAGGAAATGCAATCTAGTGTACTGAACAATAATATATGTTCCAATCATGAAGAATGTGAAGGACGCTCTGCACAGATAAAGCTGACAAAAGGTTTTTCAGCAAAGGAATCCGTAAAGGGACATATGCAGGTCAATGTGGTGAAAGGATTGAAGTTGTACGAGGACGTTTTTTCTGAATCAGAAATATGCAAGCTGACTGATTTTGTGAATGATATTCATGCTGCTGGCCAGAATGGAGAACTCTCAGGTGAAACTTTTATACTATTCAACAAACAGATGAAGGGAAACAAGAGAGAGCTGATTCAATTGGGTGTTCCGATATTTGGACAGATAAAAGATGATACCAAAAACAATATAGAGCCAATTCCAGCACTTCTCCATGATGTTATTGATCACCTTATTCAATGGAAATTAATTCCAGAGTACAAAAGGCCAAATGGTTGTATCATCAACTTTTTTGAAGAGGAGGAATTTTCTCAACCATTTCTGAAACCACCGCATCTGGACCAACCTCTATCCACACTTATTCTCTCTGAATCAACAATGGCTTTTGGACGTATCCTTGTCAGTGAAAATGATGGGAACTACAGGGGACCACTCATGCTTTCATTGAAGGAGGGGTCTCTTATAGTTATGAGGGGAAACAGTGCTGACATGGCAAGACACGTAATGTGTCCATCGCCTAACAGAAGGGTAAGCATCAGCTTCTTCAGAGTGAGGCCAGATTCCAATCAATGTCAATCACCAACTCCTACCATGACAACTGCGATGACTCTTTGGCAACCTGGCATTACAAGTCCATATACTTTGCCAAATGGAGCTCTAAGTGGCTATGAGGCAATGGATATGATGCCTAACTGGGGAACATTTGGTGCTCCAATGATTGTGCTACCCCCGATGCGCCCTATGGTAGTGAACTCTCGCAAACTTCCTCGAGGTGGGACTGGGGTTTTCTTGCCTTGGAAGGGAGCATCCAGAAAACACGCAAGACATCTACCACCTCGTGCCCAAAAAGGACGACTTATGGAATTACCCTCTCCAGTTGAATCACACTTGGGGGAGTCTACCTCTGAACCCAGTATAGCTGTTGAAGGGTAG 1551 0.4829 MAAVPASRTDPPAMVSPPVLVSDSFAKDAILAWFRGEFAAANAIIDALCGHLAHLATASSDYEATFAAIHRRRINWIPIIQMQKYHSVADVALELRRVADRKTEAGARKSETSFDEERKLEKETVETGENEGDEAAPEYDSPDSEITDSGSQEMQSSVLNNNICSNHEECEGRSAQIKLTKGFSAKESVKGHMQVNVVKGLKLYEDVFSESEICKLTDFVNDIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKDDTKNNIEPIPALLHDVIDHLIQWKLIPEYKRPNGCIINFFEEEEFSQPFLKPPHLDQPLSTLILSESTMAFGRILVSENDGNYRGPLMLSLKEGSLIVMRGNSADMARHVMCPSPNRRVSISFFRVRPDSNQCQSPTPTMTTAMTLWQPGITSPYTLPNGALSGYEAMDMMPNWGTFGAPMIVLPPMRPMVVNSRKLPRGGTGVFLPWKGASRKHARHLPPRAQKGRLMELPSPVESHLGESTSEPSIAVEG* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02186 516 MobiDBLite consensus disorder prediction 476 516 - -
Lapu1g02186 516 MobiDBLite consensus disorder prediction 102 126 - -
Lapu1g02186 516 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 295 392 IPR005123 -
Lapu1g02186 516 SUPERFAMILY Clavaminate synthase-like 195 390 - -
Lapu1g02186 516 MobiDBLite consensus disorder prediction 127 141 - -
Lapu1g02186 516 MobiDBLite consensus disorder prediction 102 155 - -
Lapu1g02186 516 Gene3D - 183 399 IPR037151 -
Lapu1g02186 516 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 26 138 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02186 Lapu-Chr1 36461156 36468921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02186 K10767 - gmx:100796344 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02186 1 36461156 36468921 Lapu1g02186 1 36461156 36468921 ECH