Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02177 ATGCCGCCTAGTCGGAAAAAGGGCGGAAAAAAAGCGGCGGCGGCGGCCGCCGCTTGCAGTCAGTTTAAGGTCGGCGATCTCGTTCTTGCTAAGGTTAAGGGATTCCCTGTTTGGCCTGCGACGGTGGATGAGCCGCAGAAGTGGGGTTACTCTGCTGATCGGAAGAAAGTATTTGTTTACTTCTTTGGAACCCAACAAATAGCATTCTGTAATCCTGCCGATGTAGAAGCATTTACTGAAGAGAAGAAACAATCTCTTGCTAAACGTCCAGGGAGGGGTGCTGATTTTGCACGTGCAGTAAAGGAGATTATTGAAAGTTATGAAAAATTGAATAGTGAGAATCTAGATGATGACACTAGTTCTGACGGTGAAGTTGCCATTGCAAACTTGTCAAATCCACTTGATTCATCTGCAAACATATGGTTAAAGGATCCGATTGAGGCTCCTTTGGCAATTAATTCACAATTGAAATCTTCAGATTGTGTGGTTGACAGACCTGAGGTAGTTTGTGCAGATGAGAATGCTGTTGCATTGAGGAATGAATCTTATAATATAGTGGCATCATTGGATGAACCTACTGATAATGCTATTGTGTCTGCTACTGTAAAATCACCTTCTCCAATTACCCTGAGAAATGAACCAGTTAGAAGGTCCAGCAGCACATTACAGGTCCAAGACTTTGTTGTACCTTGTAGTGATGGTGAAAATATAGGGGATGACAATAGTGATGACAATGTATTAGCTGACGCAATTCAGAATACGGTTATACGAAGGAGTAAACGTATCAGGAAATCTCCTGATCTTTTAGGTTGTGATGGTACTGATTCACTTGCATGTGCCTCAAATTTTAGCATGGAGGATAATGGTTCTGAAATTATTGCAACAAATCCCGATGCCTTTACTTTAAATGAGGGAAGTACAATAGATTCTAATTTAAAACCTGAACAGTCTGAGCCTATAGAGTGCCCTGAAGGTGAAGATGATTTGAACAAAGGCCTTGATCTAGAAATGAAGAGTGTAATCAGCAAGAAGAAAAGAAGACCAAATAGGAAGAAAGAAACTAATGATGCTGGTGCTCAGAATGCCTGTCAAACTTTGCTGAATATGAGTGGAAATTCAAAAGAGAGATGCCCTGATCAAGATGGAGACGAACACTTGCCCTTGGTGAAACGAGCCAGAGTTAGAATGAATAAATCATCAACAGAGGCAGAACTCAATAGCACTGTACAAGTCCAGTTAAAGAGTGGTGATGAAGATATTACTGACTCACCACATCAGATAATCATATCTTCAAACTGTGAAAATATTAGTCTAGCTGAAGGAGGTTCATCAGTCTTGAATGAAACTTTGGTTAATGTTTCTCCTTCTAACTTAATAGCTCCGTGTTCAGAAAATGGTTCTCATATTTGTAAAATTAAGAAAGACCAAATGGTTGGTTTCTCTGTGAATGATGAAGCTGCTTTACCTCCATCTAAACGTATCCATCGTGCTTTAGAAGCAATGTCTGCCAATGCTGCTGAAGAAGATCAAGCTTGCATGGAATCATCTTCCTCTATAATGGCATCAACTGGTAGGTGCTGTATATCTGCTGTCAAGAAATGTCCTTGTATGACTGTTAATAATGGAGGTAACGATTTAGAAATTCCAAAGTTGGATTCTTGCGGCATTGCTTCTTCTCATGTTAGCGTCTGTAGTTTCTCAACTCGTTCAAATACAATTATTTCCGTAGAGAATGAGTCATCTATAGAAGTGGATAAGCAGTTGGCCAAGTACAAAAATGAAATCAGGAAGGATGCCATCCTAGGTGATAGACAGCAAGTTGGTGAAGATCTCAGCGATTCTGTTATTTGTTATCCTGCCAAAATAGTTTCCCAAATTCACTTACATGGCAAAATTTCTCCTAATCTTGATATGAAATGTTGTGAAGTTGGAAGCAGTCAAGATTCACCAGATCCATCATTGTTACCGAATGGTGATGGCAACATCAGACCTTTGAACCATTCAGATGCATCGGATACATTTGAGCATGGTGGAACAAGTCTTGATCCTGTGTCAGGGGCTAGTGAAAGTGATAAATTATTACCTCAAGATAGAATTAATGTGCCCCAGAATGTGGTGGTTGTTTGTGAGGATGTGAAGCAAGTAGTTGGTGACAGCAAAAAAACTAATGACACGCATGAGGTTGTTAAAGAAGCAAAGTTTAAAGGACAAGAGGAGGATATGAATTCTGTTTCAATATCAAATGATTATTCAGGTGAAAAGGGAAATTTGGGGATTCTGTCAAGCCCATCTTTGACTGATGGGAGAGTCTGTCTTCCACCAGGTTCACCTCCAAATACAACATCAGTTTGCAATATTTCTACATCAGACAGTAGTAATATCCTTCAAAATGGAAGTTGTAGCCCTGATGTGCACCAAAAGAACACTTTATCTGGTCCTACCGATGCATGGAAAGATGGGATTGTGACAAATGAACGATCAAGATCTGTAGGCAAGTCAACTGAAGCAGGAGACGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGGCAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGATTGTGCAAAGTTTGGCATTGCAACTAAGGTGGTTGAAATTCTTGTCCGTAATCTGGAAACTGAGACAAGCCTGCATCGGAGGGTGGATCTGTTTTTTCTTGTTGATTCTATTGCTCAATGTTCTCGAGGGTTGAAAGGAGACATTGGTGGAGTATATCCATCTGCTATGAAAGCAGTGCTGCCACGTCTATTGTCTGCTGTTGCACCTCCGGGAAATGCTGCAAAAGAAAATCGTCGTCAGTGTCTTAAGGTATTAAGGCTGTGGTTGGAGAGAAAAATCCTTCCTGAACCCATTATTCGGCATCACATGCGGGAACTAGATTCATATAGCACCTCAGCTTCTGCAGGTGTCTTCACACGCCGTTCACTAAGAAGAGACAGACCTTTTGATGACCCTGTCAGAGACATGGAGGGCATGTTTGATGAATATGGAAGCAACTCAAGTTTTCAGCTACCTGGATTTTGCATGCCTCGAATGCTTGAAGATGGAGGAAGTGATTCTGATGGAGGGGAGTTTGAGGCTGTCACACCTGAGCATGATTCTGGAACAAATGAAGTTCAAGAAATGGCTCATGCAATTCAAAAACGCAGGCATGTGTTGGAAGATGTCGATGGTGAGCTTGAAATGGAAGATGTGGCTCCCTCTGTTGATCTTGAATTAAATTCGATTTGTAATGTTGATGGAGTAAATGCCCAAGAGTTTGAGAGGATTCTTCCTGTGTCCTTTTCTCCTCCTTTACCACAAGCTGTGCCACCGTCTTCCCCACCTCCACCTTCATCCCCTCCACCACCACCACCACCACCACCTCCTCCTCTTCCTCCTCCTCCTCCTGCTCTTCCTCTATCTGCACCCCCACCTACTTCGCACCTCACGTCAGCCACCTCTGATCAATATCATGTTGCAGTTGATCCAAAAGGTTTTGAAGATTCACTGACCGTTAAAGCCAATGTACTGCATCCTATGGCTCAGCCCTTTGCTGAACCAAGAAATAGTCAACCTGTCAGTGATGCAATGCAGATGCAGGCGTCTGCTTGCTCTTTCAACACTATACAATCAACCGACATTTCTAGGAATAGTGATGGTGTTACTATACATAATAAAGGTTACTCGATACCACCACCTCACCACGTGCCATCCAATCAGTTTTCTTTTGTTCATGGGGAACATAGTACGAAGTCTCAAAGGGAGGTTCTGCCACCCCTTCCATATTCCAATGATTACCACTTTGTCCCGAGCATGAAGAGAGAGTTTGGCTATGACAATCATGAGAGATTAAAACCACCTTCATATGATTACCAAGAGATATGGAATGTTCCTCCCTCTTATTCAGGTCCTTGGTATCATGATAGAGTTGTGACTGCTCCTTACGGCTGTCATCCAAGTGAACCAACTAGTTTTCCAGGTCATGGATGGAGATTTCCTCCCCCACCAATGAATTACAGGGACTCCTTGCCTTTTAGACCTCATTATGAAGATGCGATTCCAGTAGCAAACCGAGGCCCAAGCTTTTGGCAGCCCAGGTGA 4125 0.4233 MPPSRKKGGKKAAAAAAACSQFKVGDLVLAKVKGFPVWPATVDEPQKWGYSADRKKVFVYFFGTQQIAFCNPADVEAFTEEKKQSLAKRPGRGADFARAVKEIIESYEKLNSENLDDDTSSDGEVAIANLSNPLDSSANIWLKDPIEAPLAINSQLKSSDCVVDRPEVVCADENAVALRNESYNIVASLDEPTDNAIVSATVKSPSPITLRNEPVRRSSSTLQVQDFVVPCSDGENIGDDNSDDNVLADAIQNTVIRRSKRIRKSPDLLGCDGTDSLACASNFSMEDNGSEIIATNPDAFTLNEGSTIDSNLKPEQSEPIECPEGEDDLNKGLDLEMKSVISKKKRRPNRKKETNDAGAQNACQTLLNMSGNSKERCPDQDGDEHLPLVKRARVRMNKSSTEAELNSTVQVQLKSGDEDITDSPHQIIISSNCENISLAEGGSSVLNETLVNVSPSNLIAPCSENGSHICKIKKDQMVGFSVNDEAALPPSKRIHRALEAMSANAAEEDQACMESSSSIMASTGRCCISAVKKCPCMTVNNGGNDLEIPKLDSCGIASSHVSVCSFSTRSNTIISVENESSIEVDKQLAKYKNEIRKDAILGDRQQVGEDLSDSVICYPAKIVSQIHLHGKISPNLDMKCCEVGSSQDSPDPSLLPNGDGNIRPLNHSDASDTFEHGGTSLDPVSGASESDKLLPQDRINVPQNVVVVCEDVKQVVGDSKKTNDTHEVVKEAKFKGQEEDMNSVSISNDYSGEKGNLGILSSPSLTDGRVCLPPGSPPNTTSVCNISTSDSSNILQNGSCSPDVHQKNTLSGPTDAWKDGIVTNERSRSVGKSTEAGDAALLYFEAMLGTLTRAKESIGRATRIAIDCAKFGIATKVVEILVRNLETETSLHRRVDLFFLVDSIAQCSRGLKGDIGGVYPSAMKAVLPRLLSAVAPPGNAAKENRRQCLKVLRLWLERKILPEPIIRHHMRELDSYSTSASAGVFTRRSLRRDRPFDDPVRDMEGMFDEYGSNSSFQLPGFCMPRMLEDGGSDSDGGEFEAVTPEHDSGTNEVQEMAHAIQKRRHVLEDVDGELEMEDVAPSVDLELNSICNVDGVNAQEFERILPVSFSPPLPQAVPPSSPPPPSSPPPPPPPPPPPLPPPPPALPLSAPPPTSHLTSATSDQYHVAVDPKGFEDSLTVKANVLHPMAQPFAEPRNSQPVSDAMQMQASACSFNTIQSTDISRNSDGVTIHNKGYSIPPPHHVPSNQFSFVHGEHSTKSQREVLPPLPYSNDYHFVPSMKREFGYDNHERLKPPSYDYQEIWNVPPSYSGPWYHDRVVTAPYGCHPSEPTSFPGHGWRFPPPPMNYRDSLPFRPHYEDAIPVANRGPSFWQPR* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02177 1374 Gene3D - 13 116 - -
Lapu1g02177 1374 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1077 - -
Lapu1g02177 1374 SMART PWWP_4 22 79 IPR000313 -
Lapu1g02177 1374 MobiDBLite consensus disorder prediction 1112 1151 - -
Lapu1g02177 1374 MobiDBLite consensus disorder prediction 1112 1160 - -
Lapu1g02177 1374 Gene3D - 842 982 IPR008942 -
Lapu1g02177 1374 SUPERFAMILY Tudor/PWWP/MBT 20 120 - -
Lapu1g02177 1374 MobiDBLite consensus disorder prediction 303 360 - -
Lapu1g02177 1374 FunFam Enhancer of ag-4 2 839 979 - -
Lapu1g02177 1374 MobiDBLite consensus disorder prediction 324 342 - -
Lapu1g02177 1374 Pfam CID domain 844 967 IPR006569 -
Lapu1g02177 1374 Pfam PWWP domain 25 107 IPR000313 -
Lapu1g02177 1374 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Lapu1g02177 1374 MobiDBLite consensus disorder prediction 643 690 - -
Lapu1g02177 1374 SMART 558neu5 843 974 IPR006569 -
Lapu1g02177 1374 ProSiteProfiles CID domain profile. 836 977 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02177 Lapu-Chr1 36305770 36320659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02177 - - pvu:PHAVU_001G148900g 1799.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02177 1 36305770 36320659 Lapu1g02177 1 36305770 36320659 ECH
Lapu1g02177 1 36305770 36320659 Lapu7g00669 7 7709508 7729903 PCT