Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02176 ATGGGTGCTTCGGAATCAGTCTCGGAAAAATCCATCCATGAATTCACGGTCAAGGATGCCAAGGGCAGAGACGTGAACCTCACCACCTACAAGGGCAAGGTTCTTCTTGTAGTTAACGTCGCTTCAAAATGTGGATTTACGGATTCCAATTACACCCAGTTAACTGAGCTTTACAGCAGATACAAAAACAAAGGCCTGGAGATACTGGCATTTCCGTGCAACCAGTTTTTGAAGCAAGAGCCGGGGAATAGCTTGGAGGCAGAGCAATTTGCCTGTACAAGGTACAAGGCTGAGTATCCCATTTTTGGAAAGGTACGTGTCAATGGACCTGATACAGCACCTGTCTACAAATTCCTTAAAGCAAATAAATCAGGATTTATGGGCTCTAGGATAAAGTGGAATTTCACCAAGTTTTTGGTTGACAAGGAAGGGAATGTCCTCCAGCGTTATGGTCCAACCACCTCACCACTGTCCATTGAAGTACTATCTCTCCCTCTCTCCCTCTCTCCCCCTCTCTGTTAA 522 0.4559 MGASESVSEKSIHEFTVKDAKGRDVNLTTYKGKVLLVVNVASKCGFTDSNYTQLTELYSRYKNKGLEILAFPCNQFLKQEPGNSLEAEQFACTRYKAEYPIFGKVRVNGPDTAPVYKFLKANKSGFMGSRIKWNFTKFLVDKEGNVLQRYGPTTSPLSIEVLSLPLSLSPPLC* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02176 173 PRINTS Glutathione peroxidase family signature 30 47 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 PRINTS Glutathione peroxidase family signature 66 82 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 PRINTS Glutathione peroxidase family signature 131 140 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 Gene3D Glutaredoxin 2 162 - -
Lapu1g02176 173 FunFam Glutathione peroxidase 3 166 - -
Lapu1g02176 173 Pfam Glutathione peroxidase 12 120 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 PIRSF Glutathion_perox 1 166 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 PANTHER GLUTATHIONE PEROXIDASE 6 160 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 SUPERFAMILY Thioredoxin-like 11 160 IPR036249 -
Lapu1g02176 173 CDD GSH_Peroxidase 11 160 IPR000889 GO:0004602|GO:0006979
Lapu1g02176 173 ProSitePatterns Glutathione peroxidases signature 2. 69 76 IPR029760 -
Lapu1g02176 173 ProSitePatterns Glutathione peroxidases active site. 32 47 IPR029759 -
Lapu1g02176 173 ProSiteProfiles Glutathione peroxidase profile. 2 173 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02176 Lapu-Chr1 36298373 36302612 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02176 - K00432 gmx:100306136 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02176 1 36298373 36302612 Lapu1g02176 1 36298373 36302612 ECH
Lapu1g02176 1 36298373 36302612 Lapu7g00670 7 7732653 7733412 PCT