Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02175 ATGGTGCATGAGCTGATGATTGGTATGAGGAAGTTCCGACCTGGGAATTTCGTGTACGATGCGGAGGATATTCCATTTGGGACTCTGTGGTGGTTCCTTTATGCTGGAATTTCTTGCTTGCTTGTTCTCTTCGCTGGGATTATGTCTGGGCTCACTCTTGGATTAATGTCTCTGGGTCTCGTTGACCTTGAGATTCTCCAGCGTAGTGGTTCCTCCACCGAGAAGAAACAAGCTGCTGCTATTTTACCGGTTGTTCAGAAGCAGCATCAGTTGCTTGTCACCTTGCTTCTTTGTAACGCCTGTGCCATGGAGGCACTTCCAATTTACCTTGACAAAATTTTTCATCCGTTTGTAGCAGTACTGTTATCTGTGACTTTTGTTCTCGCTTTTGGAGAGGTTATCCCACAAGCTATATGCACAAGATATGGGCTCTATGTTGGTGCTAATTTTGTGGGCCTTGTACGTGTCCTCATGATCATCTGTTATCCAATTGCTTATCCTATTGGAAAGGTTCTGGATGTTTTACTTGGACATAATCATGCATTATTTAGGCGAGCGCAGCTGAAAGCCCTAGTTTCAATCCATAGCCAAGAGGCTGGTAAAGGAGGTGAACTCACTCATGACGAGGCAACAATTATCAGTGGGGCACTAGATCTCACAGAGAAGACTGCTGAGGAGGCCATGACACCAATTGAATCTACATTTTCCTTGGATGTTGCTTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGCAAGAGGCCATAGTCGTGTGCCTGTATACAGTGGAAATCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAACCTTCTTACTGTAAGAGCTGAAACAGAGACCCCAGTCAGTGCTGTTTCCATCCGGAGAATTCCTAGGGTTCCAGCAGATATGCCTCTATATGATATCCTCAATGAATTTCAAAAAGGAAGCAGTCATATGGCGGCTGTTGTCAAGGTTACACGAGAGACAAAGGTCCCTCTGGCAACTGGTAACATTGAGAAATCCAAGGATAAAGAAGTCATGAAGCATAGTTCTCAACTAACTATGCCATTGCTAGCCAGGTTTTATGAGAAATCAGAAAAAGTTGTCAATATTGACAAACTCTCCAAGCATGCTGCTGACCAGCAATTCCAGAAGGACGTCACAGCAACAAATGGTGTCTACCACTCTCTTGACAATGTTGACGATGGGGAGGAAGTTATTGGCATCATTACCTTGGAGGACGTGTTTGAGGAACTCCTTCAGGAAGAAATAGTGGACGAGACCGATGTATATATAGATGTACATAGAAGAATACGCGTGGCCGCTGTAGCAGCTGCTACATCTGTGGCACGGGTTCCTTCTGGCCGAAAGTTGACAGGTCACAAGCCTGTAGTAACTCAGAATCAGGGGAACTAA 1419 0.4447 MVHELMIGMRKFRPGNFVYDAEDIPFGTLWWFLYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILQRSGSSTEKKQAAAILPVVQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEVIPQAICTRYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDVLLGHNHALFRRAQLKALVSIHSQEAGKGGELTHDEATIISGALDLTEKTAEEAMTPIESTFSLDVASKLDWEAIGKILARGHSRVPVYSGNPKNIIGLLLVKNLLTVRAETETPVSAVSIRRIPRVPADMPLYDILNEFQKGSSHMAAVVKVTRETKVPLATGNIEKSKDKEVMKHSSQLTMPLLARFYEKSEKVVNIDKLSKHAADQQFQKDVTATNGVYHSLDNVDDGEEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAATSVARVPSGRKLTGHKPVVTQNQGN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02175 472 Pfam Cyclin M transmembrane N-terminal domain 37 208 IPR002550 -
Lapu1g02175 472 PANTHER METAL TRANSPORTER CNNM 17 445 IPR045095 GO:0010960
Lapu1g02175 472 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Lapu1g02175 472 Gene3D - 209 344 IPR046342 -
Lapu1g02175 472 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Lapu1g02175 472 Gene3D - 345 428 IPR046342 -
Lapu1g02175 472 FunFam DUF21 domain-containing protein At4g14240-like 209 346 - -
Lapu1g02175 472 SUPERFAMILY CBS-domain pair 213 422 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02175 Lapu-Chr1 36274058 36280224 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02175 K16302 - gmx:100777230 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02175 1 36274058 36280224 Lapu1g02175 1 36274058 36280224 ECH