Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02170 ATGAAGCTCGTCAGGTTTCTCATGAAGCTGAACAACGAAACCGTATCGATTGAGCTTAAGAATGGAACTGTTGTTCACGGCACCATTACAGGTGTTGATATCAGTATGAATACTCATTTAAAAACAGTTAAACTAACTCTGAAAGGGAAAAACCCAGTTACTTTGGATCATTTGAGTGTGAGAGGCAACAACATTCGTTATTATATCCTTCCTGACAGTTTGAATCTTGAGACTCTACTGGTTGAAGAGGCTCCAAGGATCAAGCCTAAGAAGCCAACTGCTGGTACTGGAAGCCTTTGGGGCGAGGTCGGGGGCGAGGGCGTGGACGTGGCCGCGGTCGTGGACGGAATTTTCTGA 357 0.4566 MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEEAPRIKPKKPTAGTGSLWGEVGGEGVDVAAVVDGIF* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02170 118 SMART Sm3 5 70 IPR001163 -
Lapu1g02170 118 Gene3D - 1 49 - -
Lapu1g02170 118 Gene3D - 50 82 - -
Lapu1g02170 118 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 4 101 IPR027141 GO:0006396
Lapu1g02170 118 Pfam LSM domain 5 69 IPR001163 -
Lapu1g02170 118 SUPERFAMILY Sm-like ribonucleoproteins 4 93 IPR010920 -
Lapu1g02170 118 FunFam Small nuclear ribonucleoprotein Sm D1 1 82 - -
Lapu1g02170 118 CDD Sm_D1 2 93 IPR034102 GO:0000387
Lapu1g02170 118 ProSiteProfiles Sm domain profile. 2 74 IPR047575 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02170 Lapu-Chr1 36203510 36210843 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02170 K11087 - jre:109010907 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02170 1 36203510 36210843 Lapu1g02170 1 36203510 36210843 ECH