Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02156 ATGAATGTTCAGCTATCAGGTTTATGGGTCCCCAACTCTCCACCATTTCCTGCACACTTCCTTCCCAACCGTTGCAGATTCTCCGCATCAGCTCTCTCATCCCAATCGCCCACTATTCAGATAATTGGTGTGGGAGGCCCCACTAGGAGGGATAATGGATATGGCAATCCCAATGGCAACTTATTTGATGGGTCTCCAGGAGAGAGTCATCATTGGAGTGACCTTGACACTGATCTTTATCACTGGACAAAGACATTGCGCCCTGTGCAGTGGTTTCCTGGTCATATTGCAAAAGCAGAAAAAGAACTGAAGGAGCAGCTCAAGTTGATGGATGTTGTGATAGAGGTGCGGGATGGACGAATTCCTATGTCCACAAGTCATCCACAGATGGATGTATGGCTTGGAAATAGAAGGAGAATTTTGGTTTTAAATAGAGAAGACATGATATCAACTGCAGACCGCAATGCTTGGGCAGATTATTTTACTAGGAATGGCACAAAGGCTGTCTTCTCCAATGGGAAACTTGGAATGGGTACGATGAAGCTAGGCCGGTTAGCAAAGGAATTAGCAGCTGATGTAAATATTAAGCGTAGAGCCAAAGGGCTACTTCCTCGTGCGATTCGAGCTGGAATAGTGGGATACCCTAATGTTGGAAAATCATCTTTGATCAACCGTTTGCTAAAGCGAAGAATGTGCCCAGCAGCTCCCAGGCCTGGAGTTACAAGAGAGTTGAGGTGGGTTCGTTTTGGGAAAGATCTTGAACTGCTGGATTCTCCTGGGATACTCCCAATGCGTATCAGTGATCAGTCAGCTGCTATAAAACTAGCCATATGTGATGACATTGGAGAGAGGTCCTATGATGTGGCTGATGTTGCTGCAATTCTTGTGCAGATGCTCACAAAGCTTCCCACAGTAGGCGGCGATACGCTTCGTAAACGGTACAAGATTGATGTAGATAGTCAATGTGGTAAAATATTCATAGAGAAGCTTGCAGTTCGAGTATTTAATGGAGATGTTCATCAAGCAGCATTCCGCGTCCTAGCAGATTTTAGAAAAGGTAAGTTTGGTTGGACTGCACTGGAGAGGCCCTCTAGGTGA 1098 0.4563 MNVQLSGLWVPNSPPFPAHFLPNRCRFSASALSSQSPTIQIIGVGGPTRRDNGYGNPNGNLFDGSPGESHHWSDLDTDLYHWTKTLRPVQWFPGHIAKAEKELKEQLKLMDVVIEVRDGRIPMSTSHPQMDVWLGNRRRILVLNREDMISTADRNAWADYFTRNGTKAVFSNGKLGMGTMKLGRLAKELAADVNIKRRAKGLLPRAIRAGIVGYPNVGKSSLINRLLKRRMCPAAPRPGVTRELRWVRFGKDLELLDSPGILPMRISDQSAAIKLAICDDIGERSYDVADVAAILVQMLTKLPTVGGDTLRKRYKIDVDSQCGKIFIEKLAVRVFNGDVHQAAFRVLADFRKGKFGWTALERPSR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02156 365 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 95 279 IPR027417 -
Lapu1g02156 365 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 77 364 - -
Lapu1g02156 365 NCBIfam ribosome biogenesis GTPase YlqF 89 361 IPR019991 -
Lapu1g02156 365 CDD YlqF 91 262 - -
Lapu1g02156 365 Gene3D - 89 262 IPR027417 -
Lapu1g02156 365 FunFam DAR GTPase 3 chloroplastic 89 262 - -
Lapu1g02156 365 PRINTS GTP1/OBG GTP-binding protein family signature 209 229 IPR006073 GO:0005525
Lapu1g02156 365 PRINTS GTP1/OBG GTP-binding protein family signature 255 270 IPR006073 GO:0005525
Lapu1g02156 365 Pfam 50S ribosome-binding GTPase 209 296 IPR006073 GO:0005525
Lapu1g02156 365 Gene3D - 267 355 IPR023179 -
Lapu1g02156 365 FunFam Mitochondrial GTPase 1 267 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02156 Lapu-Chr1 35881875 35886209 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02156 K19828 - gmx:100784201 669.848