Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02153 ATGGATCGAACCAGAGGAAGATCGTCCTCGTCCATGTCCTCAAACGCCTTCCCTAGACGCCGTCACCCTACTATCTCCCTCCGAGCCACTTCTCAGGAGGTGCAGGAGATGAGGTTAAAGGATAATAATGATGATGATGATAATAATAACAAGAGGGAATGGACGAAGAAGAGGAGAGGGAGTAACTCTCACAGCACCGAGGAAGAGAGTGCGGGGAATGAACAAGACGCGCGGTTGCATTCTAACAATACTGCATCGTCCGCATCTGATCATAACCACCGGGTACGGAACGTAATCGACGAAGTGATGATCGGTGCTACAGTGCCCAGGAGGACTCGTTCAGCTTCTGTGAAAAGACCGCATCACATTTGGGTTGAGGAGCAGAGTGCTGAAGCTGCATCGCCTTCGTCTTATTCAAATGTTTGTCTTCCCAAGAAGATGAAAGCGACTGGACCGTCTTCGTCGAATCAGGAGGACATCGAGATTGAGATAGCTGAGCTTCTGTACGGTTTAAGAGCTTCTCAGAACCATGGTTATTCTTCTTCACAGAAGGTTGAAGCAAGTGATTCGCCTCCACTTTCGTCTTACCCGTCCATTGATGTCGAGAAGAAGAAAGTGGAAAATTACAGTTCTTCTATTTTCACTCTACCTCCGAACAATTCAATTGCCGAGTCAGTCAGAATTGGAAGCCAGCAACCTGCGAAAACGGAGAAAGCTTCGTCCGAATCGCCTAGAATGTCTGGTGGTCATGGAATTGGGTCATCCCAGGGTCCAAAACAGGACACGGAGGGAGATAATTTGAGTCCAGGTTGTGGATGTGGGGATGCTGTAAATGGAAATTCAGAATCCAGGTTGGATGTCGACAAACAGGATTGTGCTTCTACCATAAGGTCACTGATTATTGAACCCATTATCTTGTTGCTGACTTTTACTAGGACAATTGACGTTGTTCCGGAGGGCAATGACAAACACAAGTTTGATATTGATCTAATGGCTCCTCCTCCTGTGACCTTATCGCCAGAATGGGATAACTTGTCCAGGGGTGAAGACAGTAACAATGTTGAAGACAGGGTAGAAAGTTTCAGTAAGAAGGAGAAAACACTGGGAGAAATTGAAGAGGTGAAAATGAAAGTTGATTTGGAGAAGCTAGATACACATAATGACCTGGCGACAAACGATGAATTTGGAGAGCGGGGTAGGAATAAGGAACAACCAACCACTACTTCTACAAATCCCAAACTGGAGAAAACTGGTAGAGGTCTCTTACACTTCTTTACTTCTTCAGCTCAATGTAGTTCAATGTCTTTGTCTGTGGCTGTATCCGAAAGGCCAAGCAGTTTCTCTCCCCTTGGTTACATGCCGCCCACGGGGACAGCTGTGAAGACGGATAAAACAACAGGATTATCGACAGCCTCTCAACATGGGAACTTTGTTCTGTCTCAACCTCGACCAAAGAGATGTGCAACCCATGGTTACATTGCTCGGAACATCTTCATGCATCAACACTGTACAAAGATGAACACCCTTTTGCCGTCCGTAATTGGCTGTGGTTCTATGTGTGACAGAAAGCTCAACAAAGTCCATTCTGCTGAAAGTGTAGTTGTTGGGAAGCAGTTTCATAAACAGTCACCAGGCGTCAGCCATAATGCTGCACCGGAGAAGGGATGGGCTGCCACTAGTGATTTTAGTCTTGCTGCAATTAAAAAAAGTTCTGGGCCTTCCAACCCAATGGATATGACGCAAATGAAGCAGCTCATGCTTCAGCAAGGTCCACATCCAGGGTCTTCTGCTAATATAGTGCATGGTCCTGCTTTTCTAATTCCTCCTAGCCAGCATACTAGTCCAGCTGGTGGTGTGAACAACGCTAGCACTGCTTCCTTGTCTAATAAATTCCACAGTTCCCCAGCTGTATCTCTTGGTGCCCCAACACTACCAGCAGTTGCTGCTGCAATGAGTTTTAGCTATCCAAATTTGGCAGCCAACGATGCTCCATATATGACAATAGTTCCGAATAGTGGGTATCCATTCCCCTTTTCAACTCCCCTTGGACCATCTGCAGCTATCAGAGGTCCAAGCCCTGCACAGTCAACACCTATTCTCAATGGGCCTTTGTACTCTTCCCAGATCTTCCACCCACTTCAGTATCCACAACAGCATCCTCATTCCCAACCACTGGTTCAACCTAGTTATCTTAATGCAAGCACATCTAGTGTTTCATCAACATCCCATAAGCAGTCACAGGGAATGCAAGGTAACAACAGTCATATTTTGTCCCCCACAACTTTGCAACTTCAGCAGTCACAAAAGCAGCACACCTCGCAGTCTCACCTTCGCAAGAATGAGACTGGGATAGCGGGAGAGAATGCTCCATCTGCTGCAAGTGGAGCAGCTTACTCCCAAAAGAATGTATTTGGGCAAAACTTCCCTATTCCAGTTCAGCCACTGAGCCTTTCTTTAGCGCCATCTACAACATCAGAGAGTGTTGGTGGCAACAGTGGAAATTTTGGTGATAAGCAGCAACAGACTTTGAAGGGGGGACTCGAGCATATTCCATCTCAACCACATGCAATCTCATTTGCTGCATATAATGGGACAAGTGTTCCTTCAAATCTTAACTTCTCAACCATGGCACAAAACCCTGTGATATTTCAGAGCCTGCCAGATATTGGATGGCAAGGTTACCATGCTGCAAGTACATCTCATGCAACTCAACAAAAGATGTATCCCATTATAGAAGGGAACAGTGGAGATAGTTCTTCCCACCGAGATGATGAAAAGAAAGCTACTTCTGGGAAGCCATCAACCAACGGGCCAACAACCCTTGTTTTTGATAATTCAGCAAATAATCTTAACTTAGTTTCATCTCCGATGAATGGAAACTGGCCCAGTCGTTCCATTACTTCAGCTGCAACAACCACAAGTTTGCCTCTTTCTAGTAATGCTGCAAAGTCTCAACAGCCGTCACAGCTGCTTCATCTTCAGCAGCAGCATGGAATGTTACAGCAGCAACAAGCAGTCGCTACTCGATATAAAGCCTCATCAGCTAATGCTACAATTGGTGCAAATTTTTTTACTTCCCCTGTTTATTCACAAACTCAAACTCAGAGCAAAAGTTCGGCTAAAGGCTCCCAATCAAAAATCTTTGTAACAGCCCCAGATTCTCTTGTTCATAACCCGTGCATCATAACTTCTACTGCCCCAAATCTCCAAAGTTTTTCCCAGGATCAAGGAAGAGTACTGCAGGGTCATACTCAAATATCTTTTGGTGGAAATTACATGTCGTCCGTGCCACTCCAAGGGCAACAGCCATTCAATAATAACCAGTCTCTTAGTACAACAGTTGCGGGAATTCCACCTAGTGGATCCAATTTGAAAACAAATTCCCAGGGGAGCAAGGTTAGTTCATCAGTGAACTCTTCGCAGATGCAACAAACTGAGAATTCTTCCACTGGGACTGGCCAAAAATCTTCCCCAGTTTGTGGGAGAAATGTCCCATCGATCTTGAGCTCGTGCCCCAGCCATCTATCTGAGCTGAAGTATTAG 3543 0.4558 MDRTRGRSSSSMSSNAFPRRRHPTISLRATSQEVQEMRLKDNNDDDDNNNKREWTKKRRGSNSHSTEEESAGNEQDARLHSNNTASSASDHNHRVRNVIDEVMIGATVPRRTRSASVKRPHHIWVEEQSAEAASPSSYSNVCLPKKMKATGPSSSNQEDIEIEIAELLYGLRASQNHGYSSSQKVEASDSPPLSSYPSIDVEKKKVENYSSSIFTLPPNNSIAESVRIGSQQPAKTEKASSESPRMSGGHGIGSSQGPKQDTEGDNLSPGCGCGDAVNGNSESRLDVDKQDCASTIRSLIIEPIILLLTFTRTIDVVPEGNDKHKFDIDLMAPPPVTLSPEWDNLSRGEDSNNVEDRVESFSKKEKTLGEIEEVKMKVDLEKLDTHNDLATNDEFGERGRNKEQPTTTSTNPKLEKTGRGLLHFFTSSAQCSSMSLSVAVSERPSSFSPLGYMPPTGTAVKTDKTTGLSTASQHGNFVLSQPRPKRCATHGYIARNIFMHQHCTKMNTLLPSVIGCGSMCDRKLNKVHSAESVVVGKQFHKQSPGVSHNAAPEKGWAATSDFSLAAIKKSSGPSNPMDMTQMKQLMLQQGPHPGSSANIVHGPAFLIPPSQHTSPAGGVNNASTASLSNKFHSSPAVSLGAPTLPAVAAAMSFSYPNLAANDAPYMTIVPNSGYPFPFSTPLGPSAAIRGPSPAQSTPILNGPLYSSQIFHPLQYPQQHPHSQPLVQPSYLNASTSSVSSTSHKQSQGMQGNNSHILSPTTLQLQQSQKQHTSQSHLRKNETGIAGENAPSAASGAAYSQKNVFGQNFPIPVQPLSLSLAPSTTSESVGGNSGNFGDKQQQTLKGGLEHIPSQPHAISFAAYNGTSVPSNLNFSTMAQNPVIFQSLPDIGWQGYHAASTSHATQQKMYPIIEGNSGDSSSHRDDEKKATSGKPSTNGPTTLVFDNSANNLNLVSSPMNGNWPSRSITSAATTTSLPLSSNAAKSQQPSQLLHLQQQHGMLQQQQAVATRYKASSANATIGANFFTSPVYSQTQTQSKSSAKGSQSKIFVTAPDSLVHNPCIITSTAPNLQSFSQDQGRVLQGHTQISFGGNYMSSVPLQGQQPFNNNQSLSTTVAGIPPSGSNLKTNSQGSKVSSSVNSSQMQQTENSSTGTGQKSSPVCGRNVPSILSSCPSHLSELKY* 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02153 1180 PANTHER PROTEIN TIME FOR COFFEE 1 221 IPR039317 GO:0042752
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 388 415 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 1 97 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 224 270 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 7 33 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 910 943 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 224 263 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 76 92 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 34 75 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 733 756 - -
Lapu1g02153 1180 MobiDBLite consensus disorder prediction 1097 1163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02153 Lapu-Chr1 35783130 35788527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02153 - - vra:106757719 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02153 1 35783130 35788527 Lapu1g02153 1 35783130 35788527 ECH
Lapu1g02153 1 35783130 35788527 Lapu7g00237 7 2693806 2699681 PCT