Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02147 ATGGATTCTGTTGTCCTTCACAGTGTGAGTGCATCATCAGCGGCCGCGTCGTCAATGGCGAAGCGTCCGTGTCCGTCGCAAAACCCTAGAGTGGAGAACCTTAGCGATGTGGAGCGTCTTCTTGACGCGTTTCTCTCCCTCTCTGACCTCCCTTCTCTCTCCCTGGATCTCTCCTTCGAGAGGCTTCTCCAATCGGTCCCCTCCGACTCCGATCTTATCGATCGCGCCCTCAAAATGGGTTCTCTCCTCCTCGACGCCGCCAAACACTCCTCTCGGAAACGTGCTTCCAACCACAATTCCCTCGCCTGGCCCCTCCCTCCCGACCTCACCATCAAGGTGTTCTCAATGCTTGATACCCAGAGCCTGTGCTATGCATCAGCTACTTGTTCAATGTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATGCAAATCTTGATTTGACAACACTTGTTCCGAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGAGTTGTTCCTGGAGCTACTACTTCACTTGGATCTTGTCCACCATTTGTTTGTACCATCAGAAATGCCATTGTAGACGTTTCAAACTTTTCATGGAATGATAAGAGATCTCGACAAGGGAGGGAGTCATCCATTCTCACAAGATGCTGTTTAAGCCCTTTAAGTGGTGATGGTGGTGCTCCAGGGGCTCTTTTGAGAAAGTTGCACTTGTACAATATTGAGAGAATGGATAATGCATCCCTTGGTGCAGCATTGTCAGCATGCCCATCTCTCCTTGATTTGGAAATTGTTGGGCTCCATGTTGAGCTGAGGCAAACATTAATGTCAGTAAGTGCAAACTGCAGCTTGATAGAGCGGTTGTTTTTTGAGTCTTCTAAAACAGGTAGAGATGACAGCTTGAAAGCACAAACCTGTTTTGAGCTAGTAAACAATTGTCCCCATCTAACTTCTTTATCCCTTAGAGGGTTTAAGCTACATGATTGCAAAGTTCGTGTACTGGTTAAGGGATTTAGGAAACTGAAATATGTTGACTTTTCAACATCCTATTCAATCACTGGTAACTTCTTAAGAAACCTTGGAAGCTGCAATGGGGGGAATTTACTTGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTCGCAAGGCTGTTGACTGCAATTCTTGCTGGAGATTTCAAATTTCTTGTACATCTTGACATATCCAATAGGGAAGGTTTGGCATCTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGTATTATGCCTATAAAACAGGTTTTGGAAGCGAGGTCTGATATGTGTCTGGTGGCTGAATATCCATCAGCAGAAGGAAGTTATATTGAGACATTTGATGCTGATATGAATAGTGAGATAAGTCTGCCCTCACAATTGAGTAGCCACACGTCGGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCAGGGAAGTGGCAATGAGGACGGTCAAGATGCCAACTACGTGATATACGAGGAAAGCTCGGATGAGATTGACTTTTTATCCCTCTAG 1581 0.451 MDSVVLHSVSASSAAASSMAKRPCPSQNPRVENLSDVERLLDAFLSLSDLPSLSLDLSFERLLQSVPSDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLAWPLPPDLTIKVFSMLDTQSLCYASATCSMFSKCAKDPLCYANLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPGATTSLGSCPPFVCTIRNAIVDVSNFSWNDKRSRQGRESSILTRCCLSPLSGDGGAPGALLRKLHLYNIERMDNASLGAALSACPSLLDLEIVGLHVELRQTLMSVSANCSLIERLFFESSKTGRDDSLKAQTCFELVNNCPHLTSLSLRGFKLHDCKVRVLVKGFRKLKYVDFSTSYSITGNFLRNLGSCNGGNLLEVLILRDCMHLKEMEVARLLTAILAGDFKFLVHLDISNREGLASEADWYHRCYNSSIMPIKQVLEARSDMCLVAEYPSAEGSYIETFDADMNSEISLPSQLSSHTSDGSIFMSTSESSYNSDQGSGNEDGQDANYVIYEESSDEIDFLSL* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02147 526 MobiDBLite consensus disorder prediction 488 507 - -
Lapu1g02147 526 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 104 393 - -
Lapu1g02147 526 SUPERFAMILY RNI-like 236 419 - -
Lapu1g02147 526 FunFam F-box protein isoform A 98 399 - -
Lapu1g02147 526 Pfam F-box-like 105 147 IPR001810 GO:0005515
Lapu1g02147 526 SUPERFAMILY F-box domain 92 149 IPR036047 GO:0005515
Lapu1g02147 526 Gene3D Ribonuclease Inhibitor 100 404 IPR032675 -
Lapu1g02147 526 MobiDBLite consensus disorder prediction 488 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02147 Lapu-Chr1 35671931 35680607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02147 K10268 - gmx:100786317 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02147 1 35671931 35680607 Lapu1g02147 1 35671931 35680607 ECH