Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02138 ATGATGTCTGGACTGATTGAAGGACTTCCTGATGCTGTTGCAATTAGGTGCCTTGCGCGCGTTCCTTTCTACCTTCACCCGGTGTTAGAGCTTGTCTCTCGTTCTTGGCAAGCAGCTATTCGTAGCTCTGAACTATTTAAAGCTCGGCAGGAGGTTGGTTCGACCGAGGATCTGTTATGTGTCTGTGCTTTTGATCCAGAGAACTTGTGGCAGCTGTATGACCCTATGCGAGATCTCTGGATTACACTTCCTATTCTTCCATCAAAGATCAGGCACCTTTCCCACTTTGGTGCGGTTTCCACTGCTGGAAAGTTGTTTGTGATTGGTGGTGGAAGTGATGCTGTTGATCCTTTGACTGGGGACCAAGATGGTTGTTTCGCAACGGATGAAGTCTGGTCATATGACCCTGTAGTTCGACAGTGGGCCCCTCGTGCACCAATGCTTGTCCCCCGTTCTATGTTTGCATGCTGTGTTTTGGATGGGAAAATTGTTGTAGCCGGGGGTTTCACTAGCTGCAGAAAATCAATATCTCAAGCAGAAATGTATGATCCTGAGAAGGATGTTTGGATTCCAATGCCTGATCTTCATCGCACTCATAATTCGGCCTGCTCAGGAGTAGTGATCGGTGGAAAGGTGCATGTACTGCACAAGGATATGTCAACAGTGCAAGTTTTAGACAATGCAGGACCTGGGTGGATCGTTGAGGAATGTGCATGGCTCCAAGGTCCGATGGCAGTTGTCCGTGATGCACTTTATGTGATGAGCCATGGATTAATCTTCAAGCAGGACAAAGAAGTGAGAAAGGTTGTAGGTTCAGCATCTGAGTTTCGAAAGAGAATTGGATTTGCAATGGCTGGACTAGGCGATGAGTTATACGTGATTGGAGGCTTCATTGGCCCTGATAGGTGGAATTGGGACATTAAGCCATTATCCGAAGTTGATGTTCTCACACTTGGAAATGAGAGACCAACTTGGCGCCAGGCAGCTCCAATGACTTGGTGTCATGGTACTATTCTTGGTTGTACGCTGCTGAGAATTTAG 1041 0.4717 MMSGLIEGLPDAVAIRCLARVPFYLHPVLELVSRSWQAAIRSSELFKARQEVGSTEDLLCVCAFDPENLWQLYDPMRDLWITLPILPSKIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGDQDGCFATDEVWSYDPVVRQWAPRAPMLVPRSMFACCVLDGKIVVAGGFTSCRKSISQAEMYDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNAGPGWIVEECAWLQGPMAVVRDALYVMSHGLIFKQDKEVRKVVGSASEFRKRIGFAMAGLGDELYVIGGFIGPDRWNWDIKPLSEVDVLTLGNERPTWRQAAPMTWCHGTILGCTLLRI* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02138 346 Gene3D - 60 342 IPR015915 GO:0005515
Lapu1g02138 346 PANTHER OS02G0202900 PROTEIN 4 266 IPR045887 -
Lapu1g02138 346 SMART kelc_smart 290 345 IPR006652 GO:0005515
Lapu1g02138 346 SMART kelc_smart 162 209 IPR006652 GO:0005515
Lapu1g02138 346 SMART kelc_smart 104 161 IPR006652 GO:0005515
Lapu1g02138 346 Pfam Kelch motif 93 147 IPR006652 GO:0005515
Lapu1g02138 346 Pfam Kelch motif 279 331 IPR006652 GO:0005515
Lapu1g02138 346 Pfam Kelch motif 150 195 IPR006652 GO:0005515
Lapu1g02138 346 CDD F-box_AtAFR-like 5 49 - -
Lapu1g02138 346 SMART fbox_2 9 49 IPR001810 GO:0005515
Lapu1g02138 346 SUPERFAMILY Kelch motif 62 332 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02138 Lapu-Chr1 35516621 35520457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g02138 9 189 Miscellaneous Gene Families AT4G33900 30.526 7.50e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02138 - - gmx:100800954 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02138 1 35516621 35520457 Lapu1g02138 1 35516621 35520457 ECH