Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g02133 ATGTCGTCGTTAATATCAGATTTGCTCCGTCAAAGCGGCGGCGTCGCCGTCATCGACGGCGGTCTTGCGACAGAGCTGGAGCGCCACGGTGCGGACCTCAACGATCCCCTGTGGAGCGCCAAATGCCTCTTTTCCTCTCCTCATCTCATTCGACAGGTGCACCTTGATTACCTGGAAAATGGCGCTGACATTATAATCACAGCATCTTATCAAGCCACCATTCAAGGTTTTCGAGCCAAAGGCTATACTGATGAAGAGAGTGAAGCCATGCTCAGAAGGAGTGTTGAAATTGCTCGCGAGGCGCGTGAATTGTACTATAAAGGATGTGCTGAATGCTGTTCAGGTGACGGGGCTGATGGTAGAATCCTCAAACAACGGCCTATACTCATTGCTGCGTCAGTGGGGAGCTATGGAGCTTATTTAGCCGACGGATCAGAGTACAGTGGTGATTATGGTGAGGCTATCACGAAGACAACTCTAAAAGATTTTCATCGGAGAAGAGTTCAAATTTTAGCAGATTCAGGTGCTGATCTGCTTGCATTTGAAACAGTGCCCAATAAGCTTGAAGCTGAGCAGGCTTATGCTCAGCTTCTGGAAGAAGAGGACATAAAAATTCCAGCATGGTTTGCTTTCAACTCTAAGGATGGAGTTAGTGTTGTTAGCGGTGATTCTCTAATGGAATGTGGCTCTGTTGCTGAATCATGCAATAAAGTTGTTGCTGTTGGAATTAACTGTACCCCGCCTAGATTTATACATGATCTTATTGTTTTGCTTAAGAAGGTGACAACAAAACCAATTGTAATATATCCAAACAGTGGGGAAACTTATGATGCTGAAGTAAAGGAGTGGGTGCAAAATACTGGTGTAACAGATGAAGATTTTATCTCTTACGTTACTAAATGGCGAGAACTAGGGGCTTCTCTTATAGGTGGCTGTTGCAGAACGACTCCAGCTACTATAAGGAAGATATACAGGGTACTGTCTAGCAGTGAATCTGCTATTCTTGGCAAAGAGTGA 1017 0.4503 MSSLISDLLRQSGGVAVIDGGLATELERHGADLNDPLWSAKCLFSSPHLIRQVHLDYLENGADIIITASYQATIQGFRAKGYTDEESEAMLRRSVEIAREARELYYKGCAECCSGDGADGRILKQRPILIAASVGSYGAYLADGSEYSGDYGEAITKTTLKDFHRRRVQILADSGADLLAFETVPNKLEAEQAYAQLLEEEDIKIPAWFAFNSKDGVSVVSGDSLMECGSVAESCNKVVAVGINCTPPRFIHDLIVLLKKVTTKPIVIYPNSGETYDAEVKEWVQNTGVTDEDFISYVTKWRELGASLIGGCCRTTPATIRKIYRVLSSSESAILGKE* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g02133 338 ProSiteProfiles Homocysteine-binding domain profile. 4 327 IPR003726 -
Lapu1g02133 338 Gene3D - 5 325 IPR036589 -
Lapu1g02133 338 PIRSF BHMT 270 336 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lapu1g02133 338 PIRSF BHMT 5 201 IPR017226 GO:0008168|GO:0008270|GO:0009086
Lapu1g02133 338 Pfam Homocysteine S-methyltransferase 17 325 IPR003726 -
Lapu1g02133 338 PANTHER ZGC:172121 3 331 - -
Lapu1g02133 338 FunFam Homocysteine S-methyltransferase 5 326 - -
Lapu1g02133 338 SUPERFAMILY Homocysteine S-methyltransferase 9 329 IPR036589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g02133 Lapu-Chr1 35466785 35484407 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g02133 K00547 - gmx:100790567 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g02133 1 35466785 35484407 Lapu1g02133 1 35466785 35484407 ECH