Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01857 ATGGAAACAATGTTGCCTCAGAAGCAAGCAGAGGAAGCAATAGTGCCAAGCCTTAACGAGACAGAGAGTGAAGTGGGAGGTGTGAGGGAAGAAGAGAAGGAGTTGCAAGACAACTCCATATTCAGTATCAAAAACTTACTCTGGCACGGAGGCTCTGTTTGGGACGCATGGTTCAGCTGTGCTTCAAATCAAGTGGCTCAAGTGCTGTTGACACTTCCCTGTTCTTTCTCTCAACTTGGCATGGTATCAGGGATCTTGCTTCAGATTTTCTATGGAATCATGGGAAGTTGGACAGCGTATCTAATAAGTGTCCTCTACATGGAGTACCGTGCCAGAAAGGAAAAAGAAAATGTCAGTTTCAAGAACCATGTCATTCAGTGGTTTGAAGTGCTTGATGGGTTGCTGGGTCCGTACTGGAAAGCGGTGGGGTTAGCCTTCAACTGTACTTTCCTTCTCTTTGGATCTGTGATTCAGCTTATAGCATGTGCAAGTAACATTTACTACATAAATGACCACTTGGATAAACGGACTTGGACTTACATCTTTGGAGCTTGCTGTGCCACCTCTGTGTTCATACCCTCCTTCCACAATTACCGTATTTGGTCTTTTCTTGGACTTGGAATGACCACTTACACTGCTTGGTACTTGGCTATAGCAGCTCTCATTCATGGCCAGGCAGAAAATGTGACACACACGGGTCCAACAAAGCTAGTGCTGTACTTTACTGGAGCCACTAACATACTGTACACATTTGGTGGACATGCAGTTACTGTAGAGATTATGCACGCCATGTGGAAACCACAGAAGTTCAAGTACATATACTTGCTGGCCACTTTGTACGTTTTCACACTAACGATTCCTTCTGCTGCTGCCGTTTACTGGGCTTTTGGGGATGAACTTCTCAATCATTCCAATGCATTCTCTCTCCTTCCCAAAAATGGATTTCGTGATGCTGCTGTAATCCTCATGCTCATTCACCAGTTCATCACGTTCGGATTTGCTTCTACACCACTGTACTTTGTCTGGGAGAAGGTAATTGGGATGCATGACACAAAAAGCATTTGTCTAAGGGCACTAGCAAGGTTGCCAGTGGTGATTCCAATATGGTTTTTTGCCATAATCTTCCCCTTCTTTGGACCCATCAACTCTGCAGTTGGAGCTCTTCTGGTTAGTTTCACTGTCTACATCATCCCATCCACAGCACATATGCTCACTTACAGAAAAGCCTCCGCAAGACAGAATGCTGCTGAGAAGCCTCCTTTCTTTATGCCAAGCTGGACTGCAATGTATGTGTTCAATGCATTCATTGTGGTGTGGGTTTTGGTGGTTGGGTTTGGGTTTGGAGGATGGGCCAGCATGTCCAACTTCATCAAGCAAATTGACAATTTTGGGCTCTTTGCCAAGTGCTATCAATGCAAGTCCCCAACTCCACCACCCATGACAGCAGCACCACCACTCCCTCACCACCATCATCACTGA 1479 0.455 METMLPQKQAEEAIVPSLNETESEVGGVREEEKELQDNSIFSIKNLLWHGGSVWDAWFSCASNQVAQVLLTLPCSFSQLGMVSGILLQIFYGIMGSWTAYLISVLYMEYRARKEKENVSFKNHVIQWFEVLDGLLGPYWKAVGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATSVFIPSFHNYRIWSFLGLGMTTYTAWYLAIAALIHGQAENVTHTGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLLATLYVFTLTIPSAAAVYWAFGDELLNHSNAFSLLPKNGFRDAAVILMLIHQFITFGFASTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFFAIIFPFFGPINSAVGALLVSFTVYIIPSTAHMLTYRKASARQNAAEKPPFFMPSWTAMYVFNAFIVVWVLVVGFGFGGWASMSNFIKQIDNFGLFAKCYQCKSPTPPPMTAAPPLPHHHHH* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01857 492 PANTHER OS05G0424000 PROTEIN-RELATED 56 438 - -
Lapu1g01857 492 Coils Coil 18 38 - -
Lapu1g01857 492 Pfam Transmembrane amino acid transporter protein 49 442 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01857 Lapu-Chr1 31669687 31677276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01857 7 472 Organic Solute Cotransporters AT2G21050 76.180 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01857 K13946 - gmx:100810532 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01857 1 31669687 31677276 Lapu10g01190 10 14871679 14879328 PCT