Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01791 ATGGCCCTTGCTCCTTCCAAAGTTTCTCCCTTTTCAGGGATCTCTCTCTCAGACGGCGTTGGGGGAGCCGTGAGAAACCCAACCTGTTCTGTTTCTCTGAACTTTCTGAATAAGAAAGTGGGAAGCAGAAACCTTGGCGTTTCTGCCTCAACTGTGCCTCTCACTGGGGTGATCTTTGAACCCTTTGAGGAGGTTAAGAAGGAAGAGCTTGCTGTTCCCACTGCTCCACAGGTTTCCATGGCTCGTCAGTACTACGCTGATGAGTGTGAATCTGCAATTAACGAGCAGATAAACGTGGAATACAATGCTTCCTATGTCTACCACTCCTTGTTTGCATACTTTGACAGGGACAACGTGGCTCTCAAGGGATTTGCCAAGTTCTTCAAGGTATCTAGCGAAGAAGAAAGAGAGCATGCTGAAAAGCTTATGAAATATCAGAATACTCGTGGTGGAAGAGTTGTTCTTCACCCCATCAAGAATGTACCCTCAGAATTTGAGCATGTGGAAAAGGGGGATGCATTGTATGCAATGGAATTAGCTTTGTCTTTGGAGAAGTTAGTGAATGAGAAACTTCGGAGTGTGCACAGTGTGGCAGATCGCAACAATGACCCTCAAATGGTAGATTTCATTGAAAGCGAGTTTCTCTCTGAACAGGTTGAAGCAATTAAGAAGATATCAGAGTATGTGGCTCAACTGAGAAGGGTCGGAAAGGGTCACGGTGTTTGGCACTTCGATCAAAGTCTGCTTCATGATGGGCATGCTGCTTGA 768 0.4583 MALAPSKVSPFSGISLSDGVGGAVRNPTCSVSLNFLNKKVGSRNLGVSASTVPLTGVIFEPFEEVKKEELAVPTAPQVSMARQYYADECESAINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKVSSEEEREHAEKLMKYQNTRGGRVVLHPIKNVPSEFEHVEKGDALYAMELALSLEKLVNEKLRSVHSVADRNNDPQMVDFIESEFLSEQVEAIKKISEYVAQLRRVGKGHGVWHFDQSLLHDGHAA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01791 255 ProSitePatterns Ferritin iron-binding regions signature 1. 134 152 IPR014034 -
Lapu1g01791 255 CDD Euk_Ferritin 87 246 - -
Lapu1g01791 255 FunFam Ferritin 52 252 - -
Lapu1g01791 255 Pfam Ferritin-like domain 91 235 IPR008331 GO:0008199
Lapu1g01791 255 ProSiteProfiles Ferritin-like diiron domain profile. 83 236 IPR009040 -
Lapu1g01791 255 PANTHER FERRITIN 63 250 IPR001519 GO:0006826|GO:0006879|GO:0008199
Lapu1g01791 255 SUPERFAMILY Ferritin-like 74 250 IPR009078 -
Lapu1g01791 255 ProSitePatterns Ferritin iron-binding regions signature 2. 203 223 IPR014034 -
Lapu1g01791 255 Gene3D - 52 252 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01791 Lapu-Chr1 30888473 30891731 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01791 K00522 - gmx:547824 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01791 1 30888473 30891731 Lapu1g01791 1 30888473 30891731 ECH
Lapu1g01791 1 30888473 30891731 Lapu10g01261 10 16666671 16670005 PCT