Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01789 ATGGATGAGATATTGAACAAGGTGGGGTCATATTGGTTCAGCCGCAAGGCCAACAAGGAGTTCAACTCTGTCGGTGATGATATCAACTCACTGTCAACCAGTATTGAAGGGGGAACCAAATGGTTGGTCAACAAATTAAAAGGTAAGATGCAAAAGCCATTAACGGAGTTACTAAAGGAGTATGATCTACCCATTGGAATCTTTCCTCGTGATGCGACAAACTACGAATTCAACGAAGAAACAGGGAAACTTGTTGTTTACATTCCTCAAGTGTGTGAAGTCGGCTACCGAGATTCATCAGTCTTGCGGTTTTCCACCAGTGTGAGTGGTTATTTGGAGAAAGGAAAGCTAGCAGAAATAGAGGGAATAAAGACTAAAGTGCTGATCTGGGTAAAAGTAACCACCATTTCATCTGAGGGACCAAAGCTCCATTTCATGGCCGGCATGAAGAAGACAAGGAAAAGGGAAGCATATGAGGTTACTAGAGATGGTATAAACGTAGATAAGTTCTAA 513 0.4211 MDEILNKVGSYWFSRKANKEFNSVGDDINSLSTSIEGGTKWLVNKLKGKMQKPLTELLKEYDLPIGIFPRDATNYEFNEETGKLVVYIPQVCEVGYRDSSVLRFSTSVSGYLEKGKLAEIEGIKTKVLIWVKVTTISSEGPKLHFMAGMKKTRKREAYEVTRDGINVDKF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01789 170 Gene3D - 32 170 IPR036758 -
Lapu1g01789 170 PANTHER T31J12.3 PROTEIN-RELATED 51 161 IPR007493 -
Lapu1g01789 170 SUPERFAMILY At5g01610-like 3 170 IPR036758 -
Lapu1g01789 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01789 Lapu-Chr1 30871588 30875248 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01789 - - gmx:100305947 326.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01789 1 30871588 30875248 Lapu1g01789 1 30871588 30875248 ECH
Lapu1g01789 1 30871588 30875248 Lapu10g01262 10 16680732 16684064 PCT