Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01486 ATGGCGACCGCGGCGGTGCTCTTTTATCGCCTCCGCCACGCGCGGTCATCCTCCTTCCTCTCCATCCTATCACTGCCACGTGTCCTATCCTCTCAGCGCCCTTCTCCACTCCCCGCTCCCGCCTTACCTCCCTCTCCAAACCCCGCCTTTCTCGACGCGTTCCACTCACGCGCTTTCTCCACTCGCTCTTCCGATGATCGCGAATTGGAGCCGAACTCGTTCGGTGTCGACTCGCCGCTTAACTCGGAACTTCTGCAAGCGATCGCCGATACCAGTGGCGGCGGTGAAGACGACGCCGTTTTCCCCGTTCGCGCGCTGATTTCGATGCTCGACTCGTTCCACGAGCTTTCTGGATTTCCGTGGTGGTTAACTATAGTTTCTTCTACTATAGCTCTCAGAATTTCTATTATTTTTCCTCTGGTTTTAACACTTCACAAGCTGAAAACGATTGGAGAGTTTTTCCCTAAATTGCCTCCTCCATTCCCACCACCTTTCTCAGGAAAGAGTTATATTCGTCAGTTTCTATTCTTCCAGAAGAAGAGAAAAGCGATCGGATGCCCCTCTTATGCGTGGCCGATGGTACCATTCATTGTACAGGTTCCGTGCTTTTTCTTGTGGATGATTAGCATAAGGAAGATGTCACTGAATGGTCACCCTGGTTTTGGTTGTGGTGGTGCTTTATGGTTCGAGAATTTAACAGAACTCTCTCACGGTTATTCAGGGTTCATCTTTCCTTTTCTGATTGCTGGTTTGCACTACTTCAATGTTCAGATATCCTTTGGGAAACCTGTGGTTGCGGAGGCCAGGACTATTTTTGACTTATTAGCCAAATATTATAAGCGATACTTGGACTTTCTAACAGTGCCTATAGCTCTCACGGGCTTTTGCATTCCTCAGGGGAGCCTGCTCTATTGGGTTACAAATAGTTCATTAACCCTCATTCAGCACATAGCCCTGAGACATCCTGCTGTCCTAGCAATGTTGGGGTTACAAGACAAGAATAGTCAAAAGGTAGCTACTGAGAAAATTGGTGCTTCTAACACAGCTCCTTCACCAGAGTTACTAGATAATATTCCAACAGAAGCTATCAAGGAAGCTGTTTCTACAGAAAAAAGTCCTCTGAGTTCACCTGAAAAGTGGCATAGAATTCCTATAGAGGAGATGTCCCCTAAAGAACTGACTGCTATTGCAGTCCCATTTCTATCCAGTGATGACAAAGAAAGTGCAATTCCCTTACTAAAACTAGCCCTTGATAAGGACCCTGAATATGTTCGAGCTTTAGTTTTGATGGGACGGATTCTATTGTTGAAGCATGTAAATGAGGAGGCCATTGAGTACTTCGAGCGTGCAGTTTCGAAACTTTCTTTTGCTGGATATCCAACTGATGCGGAAGAACTGGATCTTTTGATTCTTTCATCCCAGTGGGCTGGCATTGCTTGTGAACGACAGGGAAAGAGGGACGAAGGACGGGCACACTTTGAAAGAGTAGCAAATATGGAGGAGCCAGAAGATCCGACAAGCAAAGGCTATTATTTTGATGGATTACTGTTGCTTGCCAGCACTCTATTTGATGCGGGCCAAAAAGCCGAAGCTGCGAAGTACCTACGGCTTGTTGTTGCTCATAAACCTGCTTATAAAAAATTCTTGGACCAGTGTGAACAAGATGATGATGATGATCTTACGACTGATCTTGCCCGTAGAAGGAGAGGACACTAA 1716 0.4645 MATAAVLFYRLRHARSSSFLSILSLPRVLSSQRPSPLPAPALPPSPNPAFLDAFHSRAFSTRSSDDRELEPNSFGVDSPLNSELLQAIADTSGGGEDDAVFPVRALISMLDSFHELSGFPWWLTIVSSTIALRISIIFPLVLTLHKLKTIGEFFPKLPPPFPPPFSGKSYIRQFLFFQKKRKAIGCPSYAWPMVPFIVQVPCFFLWMISIRKMSLNGHPGFGCGGALWFENLTELSHGYSGFIFPFLIAGLHYFNVQISFGKPVVAEARTIFDLLAKYYKRYLDFLTVPIALTGFCIPQGSLLYWVTNSSLTLIQHIALRHPAVLAMLGLQDKNSQKVATEKIGASNTAPSPELLDNIPTEAIKEAVSTEKSPLSSPEKWHRIPIEEMSPKELTAIAVPFLSSDDKESAIPLLKLALDKDPEYVRALVLMGRILLLKHVNEEAIEYFERAVSKLSFAGYPTDAEELDLLILSSQWAGIACERQGKRDEGRAHFERVANMEEPEDPTSKGYYFDGLLLLASTLFDAGQKAEAAKYLRLVVAHKPAYKKFLDQCEQDDDDDLTTDLARRRRGH* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01486 571 PANTHER OXA1 92 339 IPR001708 GO:0016020|GO:0032977
Lapu1g01486 571 Gene3D Tetratricopeptide repeat domain 364 566 IPR011990 GO:0005515
Lapu1g01486 571 CDD 5TM_Oxa1-like 118 322 - -
Lapu1g01486 571 SUPERFAMILY TPR-like 394 546 IPR011990 GO:0005515
Lapu1g01486 571 SMART tpr_5 390 423 IPR019734 GO:0005515
Lapu1g01486 571 SMART tpr_5 424 457 IPR019734 GO:0005515
Lapu1g01486 571 SMART tpr_5 512 545 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01486 - - gmx:100797573 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01486 1 27665353 27673505 Lapu1g01486 1 27665353 27673505 ECH