Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01481 ATGGTGATGGTGATGGCACACACCACGCCCCTCCACTGTTTATGGCACCCCTTCACTCTTCTCTGTGTGATTCTTCTCTGTTTAACCCCTTCTCTCTCAATTGATGTTCACCTACAAGACAGAGCCTCTCTTCTTCTGTTCAGGTCAAGGCTGCAAGACCCCTACCAGAGTTTGTCCAGCTGGGCAGGCTCCAACTGCACTTCGTGGAGTGGAATCACCTGTGACAACAGAACTGGGAGGGTGCTTTCCATCAACCTAACTAGTATGAGCCTGTCAGGCCAAATCCACCCAAGTTTGTGCCAACTTTCATACCTCACCAAGGTGGGGTTGTCCCACAACAACTTCACTTCCCTTCTTCCTGAATGTTTTGGAAATTTGCTCAACCTAAGAGCTATTGATCTCAGCCATAACAGGTTTCACGGTGGGATACCAGACTCTTTCATGAGGCTCAGGCACCTCACTGAGCTTGTTTTGAGTGGGAACCCTGGTTTGGGTGGTCCACTTCCTGCTTGGATTGGAAACTTCTCTGCAAATCTGGAAAGGCTACATCTCGGTGTCTGTTCATTCAGTGGGGCCATACCTGAGAGCTTGCTTTACTTGAAGTCCCTCAAGTATTTAGACCTTGAGAACAATCTCTTGTCTGGAAATCTGGTTGGTTTTCAGCAGCCTTTGGTTTTGCTCAATCTTGCTTCCAATCAGTTTGCTGGTACTTTGCCTTGCTTTTCAGCTTCAGTTCAGTCTCTAACTGTGTTGAATTTGTCTAACAATTCTATTGTGGGGGGACTGCCTGCTTGTATTGCTTCCTTGCAAGCTTTGACTCATTTGAACCTGTCAGGGAACCATTTGAAGTATAGAATATATCCTAGGCTTGTGTTTTCAGAGAAACTTCTTGTTTTGGACTTGAGTTATAATGGTTTTTCTGGTCCTATTCCCAGTAAAATTGCTGAGACTACCGAGAAACTTGGCCTTGTTCTTCTTGACCTTTCTCACAATCAATTTTCTGGTGAAATTCCTGTGAAAATTACTGAGTTGAAAAGTTTGCAGGCCCTGTTTCTCTCTCACAATCTTCTCTCTGGAGAAATTCCTGCCAGAATTGGAAATTTGACCTATCTTCAGGTCATTGATCTCTCACACAACTCCTTGTCTGGTACCATTCCATTCAGCATTGTTGGGTGCTTTCAGCTGTATGCTCTAATACTGAATAACAACAATCTTTCTGGTGTAATTCAACCTGAGTTTGATGCATTGGATATCTTGAGGATACTGGATATAAGCAACAACAGGTTTTCGGGGGCTATCCCACTCACTCTGGCTGGATGTAAATCTCTCGAGATTGTAGATTTTAGTTCCAATGAACTTTCTGGATCCTTGAATGATGCAATAACCAAATGGTCAAACCTCAGGTATTTGTCCCTTGCTCAGAACAAGTTCAGTGGAAATTTGCCTAGTTGGTTGTTCACATTTGACGCAATAGAAACAATGGATTTCTCACATAACAAGTTTTCTGGCTTCATCCCTGATATTAATTTTAAGGGTAGCTTGATATTTAACACTAGGAATGTCACTGTTAAAGAGCCATTAGTTGCAGCAAGAAATGTTCAACTGAGAGTTTCAGTTGTTGTTTCTGATAGCAATCAACTCAGTTTCACCTATGATCTATCCTCTATGGTTGGAATCGATCTATCCAGCAACTTGCTCCACGGAGAGATTCCAAGGGGCTTATTTGGTCTAGCTGGCCTAGAATATCTGAATTTGTCATGCAACTTTCTCTATGGACAGCTTCCTGGTTTGCAGAAAATGCAGAGTTTGAAAGCCTTAGATCTATCACATAATTCCTTGTCAGGACATATCCCAGGAAACATTTCTAGTCTTCAAGATCTGTCCATTTTGAATCTGTCTTACAACTGTTTTTCTGGATATGTTCCCCAGAAGCAAGGATATGGGAGATTTCCTGGTGCATTTGCTGGAAATCCGGATCTGTGCATGGAATCTTCCAGTGGAGTATGTGATGATGGAAGGACTCAATCTGTGCAAGGAAGTTCTTTCAGGGAAGATAGGATGGAGGGACCAATATCTCTGGGGATTTTCTTTATCAGTGCCTTTGTAAGTTTTGATTTTGGTGTTGTTGTTCTCTTCTGTTCAGCAAGGGCAAGAAATTACATTCTGCAAACCAAAGCTTGA 2181 0.4269 MVMVMAHTTPLHCLWHPFTLLCVILLCLTPSLSIDVHLQDRASLLLFRSRLQDPYQSLSSWAGSNCTSWSGITCDNRTGRVLSINLTSMSLSGQIHPSLCQLSYLTKVGLSHNNFTSLLPECFGNLLNLRAIDLSHNRFHGGIPDSFMRLRHLTELVLSGNPGLGGPLPAWIGNFSANLERLHLGVCSFSGAIPESLLYLKSLKYLDLENNLLSGNLVGFQQPLVLLNLASNQFAGTLPCFSASVQSLTVLNLSNNSIVGGLPACIASLQALTHLNLSGNHLKYRIYPRLVFSEKLLVLDLSYNGFSGPIPSKIAETTEKLGLVLLDLSHNQFSGEIPVKITELKSLQALFLSHNLLSGEIPARIGNLTYLQVIDLSHNSLSGTIPFSIVGCFQLYALILNNNNLSGVIQPEFDALDILRILDISNNRFSGAIPLTLAGCKSLEIVDFSSNELSGSLNDAITKWSNLRYLSLAQNKFSGNLPSWLFTFDAIETMDFSHNKFSGFIPDINFKGSLIFNTRNVTVKEPLVAARNVQLRVSVVVSDSNQLSFTYDLSSMVGIDLSSNLLHGEIPRGLFGLAGLEYLNLSCNFLYGQLPGLQKMQSLKALDLSHNSLSGHIPGNISSLQDLSILNLSYNCFSGYVPQKQGYGRFPGAFAGNPDLCMESSSGVCDDGRTQSVQGSSFREDRMEGPISLGIFFISAFVSFDFGVVVLFCSARARNYILQTKA* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01481 726 ProSiteProfiles Leucine-rich repeat profile. 602 624 IPR001611 GO:0005515
Lapu1g01481 726 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Lapu1g01481 726 PRINTS Leucine-rich repeat signature 600 613 - -
Lapu1g01481 726 PRINTS Leucine-rich repeat signature 371 384 - -
Lapu1g01481 726 SUPERFAMILY RNI-like 294 639 - -
Lapu1g01481 726 PANTHER UNNAMED PRODUCT 323 698 - -
Lapu1g01481 726 Pfam Leucine rich repeat 104 162 IPR001611 GO:0005515
Lapu1g01481 726 Pfam Leucine rich repeat 419 477 IPR001611 GO:0005515
Lapu1g01481 726 Pfam Leucine rich repeat 224 282 IPR001611 GO:0005515
Lapu1g01481 726 Gene3D Ribonuclease Inhibitor 149 220 IPR032675 -
Lapu1g01481 726 SMART LRR_typ_2 102 125 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 416 439 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 600 624 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 245 268 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 344 368 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 269 294 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 200 222 IPR003591 -
Lapu1g01481 726 SMART LRR_typ_2 553 577 IPR003591 -
Lapu1g01481 726 FunFam LRR receptor-like serine/threonine-protein kinase EFR 37 318 - -
Lapu1g01481 726 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 319 511 - -
Lapu1g01481 726 Pfam Leucine Rich Repeat 602 624 IPR001611 GO:0005515
Lapu1g01481 726 Gene3D Ribonuclease Inhibitor 39 148 IPR032675 -
Lapu1g01481 726 SUPERFAMILY L domain-like 38 312 - -
Lapu1g01481 726 Gene3D Ribonuclease Inhibitor 221 671 IPR032675 -
Lapu1g01481 726 FunFam Leucine-rich repeat receptor protein kinase EMS1 548 644 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01481 323 654 Receptor kinase-like Gene Family AT5G46330 28.261 7.48e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01481 - - gmx:100814791 1304.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01481 1 27613214 27615394 Lapu1g01481 1 27613214 27615394 ECH