Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01479 ATGGCGTCGGTGTTTGTGTACCATGTGGTGGGCGATCTGACGGTGGGGAAGCCGGAGCTCGTGGAGTTTCACGAGAGTGAGACGGTGGAGTCCGCGATTAGGGCGATCGGAGAGTCCCCTGAAGGGAGCATACCCATTTGGAAGAAGAGATCTCATGTGGTGATTGAGAATAGTGAGATGAGGCAGCAGAGGTTTGTTGGTATCCTTAGTTCCTTTGACATAGTTTCGTTTTTGGCCAAGAGTCAGTGTTTGGAGGATCAGGACAAGGCCTTGAAAATTCCTGTTTCTGAGGTTGTTGTTCCTAACAATTCGCTGCTCAGGGTTGTTGACCCTGCTACAAGGTTGATAGATGCGTTGGACATGATGAAACAAGGTGTGAAACGACTGCTTGTTCCGAAGAGTGTAGCATGGAAGGGCATGAGTAAGCGATTCTCAGTTATCTACTACGGCAAGTGGCTCAAGAATAATGATTCTCCTAGCAACAGCAGCAACAACCTACATCCTAACTTGAATTGGAGCCCATCAACTTCCGGCACAGTTATCCGTGATAAGTACTGTTGTCTCTCTAGAGAAGATGTTCTCCGTTTCATCATTGGTTGTCTTGGCGCTTTGGCTCCTCTTCCTCTCACTTCTATTGCTGCTCTTGGAGCAATTAATGCAGACTACAGCTATATTGAATCATCTACTCCAGCCATTGCAGCCACTAAAATGCTTCCTCAAGATCCAAGTGCAGTTGCTGTGACAGAAAGCACATCAGATGGTCAGTGTAAGATTCTTGGAGAAATTTCAGCATGCAAGTTATGGAAATGCGATTACTTAGCAGCAGCATGGGCTTTGGCGAATCTCTCGGCCGGCCAGTTTGTCATGGGAGTTGAAGATAATGTTAGCTCAAGGTCACTACCCGAGTTCAGTGTAGACTCACCAACTGGAAACGGTAATTTAGTCAATGGTGGTGATTCAAGGAAACCAAGGAAATTCAGTAGCAGGAGTATTGGGTTCTTCAGCAATTCTGGTAGCCACAGCTTTGGTTCTAGGAGCATGTATAGAGGTAGGAGTGCACCTCTGACATGTAAACTTACTAGTTCACTGGCTGCAGTCTTGGCTCAGATGCTATCCCACAGGGCAACTCATGTTTGGGTGACCGAGGACGACAATGACGACGTTTTGGTCGGTGTGGTTGGATATACTGATATCTTAGCTGCTGTAACCAAACCGCCTACCACCATGATTCCTGTTAATAGATCTACAGAGGGGTTTGGAAATGAAATTCAGTGTTGA 1278 0.4656 MASVFVYHVVGDLTVGKPELVEFHESETVESAIRAIGESPEGSIPIWKKRSHVVIENSEMRQQRFVGILSSFDIVSFLAKSQCLEDQDKALKIPVSEVVVPNNSLLRVVDPATRLIDALDMMKQGVKRLLVPKSVAWKGMSKRFSVIYYGKWLKNNDSPSNSSNNLHPNLNWSPSTSGTVIRDKYCCLSREDVLRFIIGCLGALAPLPLTSIAALGAINADYSYIESSTPAIAATKMLPQDPSAVAVTESTSDGQCKILGEISACKLWKCDYLAAAWALANLSAGQFVMGVEDNVSSRSLPEFSVDSPTGNGNLVNGGDSRKPRKFSSRSIGFFSNSGSHSFGSRSMYRGRSAPLTCKLTSSLAAVLAQMLSHRATHVWVTEDDNDDVLVGVVGYTDILAAVTKPPTTMIPVNRSTEGFGNEIQC* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01479 425 Gene3D - 335 404 IPR046342 -
Lapu1g01479 425 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 7 406 - -
Lapu1g01479 425 CDD CBS_pair_SF 23 131 - -
Lapu1g01479 425 Gene3D - 5 135 IPR046342 -
Lapu1g01479 425 ProSiteProfiles CBS domain profile. 347 409 IPR000644 -
Lapu1g01479 425 Pfam CBS domain 353 402 IPR000644 -
Lapu1g01479 425 SUPERFAMILY CBS-domain pair 6 133 IPR046342 -
Lapu1g01479 425 SUPERFAMILY CBS-domain pair 353 405 IPR046342 -
Lapu1g01479 425 SMART cbs_1 19 79 IPR000644 -
Lapu1g01479 425 SMART cbs_1 353 403 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01479 Lapu-Chr1 27603883 27607495 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01479 - - gmx:100784349 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01479 1 27603883 27607495 Lapu1g01479 1 27603883 27607495 ECH