Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01478 ATGATAGGGTGGGAAGATGTGTACAAAGTGATTGTGGCAGTGGTGCCACTCTATGTTGCTCTAGTGTTAGGATATGGTTCACTGAAGTGGTGGAACATCTTCACTAGGGAGCAATGTGATGCAATAAACAAGCTAGTATGTTACTTCACTTTTCCACTCTTTACTTTTGAGTTCACTGCTCACATCGACCCTTTCAAAATGAACTTTTCGTTCATAGCTGCAGACACCATATCAAAGTTCATCATCATCGTGGTGCTTGCCCTTTGGGCCAAGTGCACTACTAAAGGGAGTTTTTGCTGGTTCATAACGAGCTTTTCTTTGTGCACTCTTACCAACGCTCTTGTTGTTGGGGTTCCAATGGTGAAGCCCATGTATGGAGCCCTTGGTGAGGACCTAGTGGTCCAGTCCTCCGTGGTGCAGGCCATCATATGGCTCTCTTTGCTTCTCTTTTTTTTGGAGTTTCGGAGAACAGGAATTGAAGGCACCACCACCACCACCACTTTGAAACCAAGATCAAAAACAATGATTGTTGACAACAATAGTAATAATGTGACAGGTGAAGGTGGAAGAGGGAAAGATGTGGAGGAAAATACTGTGGCTATTGATGTGAAAGAGGAGTTGGCGTTTGAAGAAACTATCAGTAGTAGGCTTCCTTTTCGCAAGTTGATGAAACTTGTGTGGCTCAAACTTGTAATGAATCCAAACTCCTACGGCTGTGTCATTGGGATTTCCTGGGCCTTCATATCCAACAGGTGGAATTTGGAGATGCCAAGTATGTTAGAGGGGTCTATACAGATCATGTCAAAGGCAGGGACTGGCACTGCCATGTTTAGTATGGGTATTTTCATGGCACTTCAGGATAAGTTGATTGCTTGTGGACCAAGTCTGACTCTATTCGGTTTGGTTTTAAAGTTCATTGCGGGCCCTGCAGCCATGGCTATTGGTGCCATCGTTGTAGGATTGCACGGTGACGTCTTGAGAGTTGCCATCATTCAGGCTGCTGTGCCACAGTCCATCACATCCTTCATTTTTGCTAAAGAATATGGGTTGCATCCAGAGGTTCTCAGCACTGCGGTGATCTTTGGCATGATTGTTTCACTTCCCATCTTAGTTGCCTACTACGCAATATTGGAGTTTATATATTAA 1146 0.4433 MIGWEDVYKVIVAVVPLYVALVLGYGSLKWWNIFTREQCDAINKLVCYFTFPLFTFEFTAHIDPFKMNFSFIAADTISKFIIIVVLALWAKCTTKGSFCWFITSFSLCTLTNALVVGVPMVKPMYGALGEDLVVQSSVVQAIIWLSLLLFFLEFRRTGIEGTTTTTTLKPRSKTMIVDNNSNNVTGEGGRGKDVEENTVAIDVKEELAFEETISSRLPFRKLMKLVWLKLVMNPNSYGCVIGISWAFISNRWNLEMPSMLEGSIQIMSKAGTGTAMFSMGIFMALQDKLIACGPSLTLFGLVLKFIAGPAAMAIGAIVVGLHGDVLRVAIIQAAVPQSITSFIFAKEYGLHPEVLSTAVIFGMIVSLPILVAYYAILEFIY* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01478 381 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 378 - -
Lapu1g01478 381 Gene3D - 226 378 IPR038770 -
Lapu1g01478 381 Pfam Membrane transport protein 10 374 IPR004776 GO:0016020|GO:0055085
Lapu1g01478 381 NCBIfam auxin efflux carrier 1 377 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01478 Lapu-Chr1 27592457 27595861 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01478 1 358 Organic Solute Cotransporters AT5G16530 66.201 6.31e-171 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01478 K13947 - gmx:100784879 573.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01478 1 27592457 27595861 Lapu1g01478 1 27592457 27595861 ECH