Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01458 ATGGCTCTGAATCTTTGTGTCTCCCCTAACTGTAAAAGGGTTGCATCTCCTTCCTTAGATAGTGGTTCTTCTTTGAAACCTTCACTTGGGTCTTGTTTTGGTAACATAAACATTGCTAGTGTGAATCTCAACTTGAGTACTAGAACTAGAAGTTTGAGTTTGAGGAAAAGTGTTAGTGTAAGATCTAGTTTGGAAACTGCAGGGCCCACAGTCACTGTGGGACAAGTCACTGAGGTAAACAAGGACACTTTCTGGCCGATTGTTAAGGCTGCCGGGGATAAAACCGTTGTCCTAGACATGTACACCCAATGGTGTGGCCCTTGCAAAGTGATGGCTCCAAAGTTTCAAGAATTATCTAAGAAGTATGAGGATGTTGTCTTTCTAAAGCTTGACTGCAACCAAGACAACAGGCCATTGGCAAAAGAGCTGGGGATTAAAGTGGTTCCAACTTTTAAAATTCTGAAGGACAACAAGGTTGTAAAAGAAGTTACTGGAGCTAAATACGATGATTTGGTTGCTGCCATAGACAATGTTCGATTGAGCTAA 546 0.4176 MALNLCVSPNCKRVASPSLDSGSSLKPSLGSCFGNINIASVNLNLSTRTRSLSLRKSVSVRSSLETAGPTVTVGQVTEVNKDTFWPIVKAAGDKTVVLDMYTQWCGPCKVMAPKFQELSKKYEDVVFLKLDCNQDNRPLAKELGIKVVPTFKILKDNKVVKEVTGAKYDDLVAAIDNVRLS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01458 181 PANTHER THIOREDOXIN-LIKE PROTEIN 1 75 176 - -
Lapu1g01458 181 Pfam Thioredoxin 76 176 IPR013766 -
Lapu1g01458 181 ProSiteProfiles Thioredoxin domain profile. 56 180 IPR013766 -
Lapu1g01458 181 SUPERFAMILY Thioredoxin-like 69 178 IPR036249 -
Lapu1g01458 181 ProSitePatterns Thioredoxin family active site. 97 115 IPR017937 -
Lapu1g01458 181 Gene3D Glutaredoxin 60 180 - -
Lapu1g01458 181 CDD TRX_family 82 176 - -
Lapu1g01458 181 PRINTS Thioredoxin family signature 96 104 - -
Lapu1g01458 181 PRINTS Thioredoxin family signature 144 155 - -
Lapu1g01458 181 PRINTS Thioredoxin family signature 104 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01458 Lapu-Chr1 27398214 27401853 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01458 K03671 - gmx:100499776 293.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01458 1 27398214 27401853 Lapu1g01458 1 27398214 27401853 ECH