Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01449 ATGGCGGCGTGTAGGAGCACTTTACCACTCATCAAGTACCTGAGAGTGCGCGTCGACGCTCTTCCCCGCAACTCTCCCTTAACCCTCGCTCCCACCTTTTTCCTTCGCCGTTTCTGCGAAGAGGTTCGTGGCAGCTTTCTCGACAAGTCCGAGGTCGCAGATCGCGTCATCTCCTGCGTCAAAAACTTCCAGAAAGTCGATCCCGCCAAGGTTACCCCTAATGCGCACTTCCAGAATGACCTTGGATTGGACAGTTTAGATGCCGTGGAGATTGTGATGGCTCTTGAGGAAGAGTTTGGGTTTGAGATTCCTGATAATGAGGCTGACAAGATCAACTCTATTAAACATGCTGTGGACTTCATTGCATCCCATCCTCAGGCAAAGTAG 387 0.5116 MAACRSTLPLIKYLRVRVDALPRNSPLTLAPTFFLRRFCEEVRGSFLDKSEVADRVISCVKNFQKVDPAKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIKHAVDFIASHPQAK* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01449 128 Gene3D - 40 127 IPR036736 -
Lapu1g01449 128 ProSiteProfiles Carrier protein (CP) domain profile. 50 125 IPR009081 -
Lapu1g01449 128 Hamap Acyl carrier protein [acpP]. 51 125 IPR003231 GO:0006633
Lapu1g01449 128 ProSitePatterns Phosphopantetheine attachment site. 80 95 IPR006162 -
Lapu1g01449 128 Pfam Phosphopantetheine attachment site 55 121 IPR009081 -
Lapu1g01449 128 FunFam Acyl carrier protein 39 127 - -
Lapu1g01449 128 NCBIfam acyl carrier protein 50 124 IPR003231 GO:0006633
Lapu1g01449 128 SUPERFAMILY ACP-like 48 124 IPR036736 -
Lapu1g01449 128 PANTHER ACYL CARRIER PROTEIN 8 126 IPR003231 GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01449 Lapu-Chr1 27342377 27344420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01449 10 128 Acyl Lipid Metabolism Gene Families AT1G65290 74.167 2.88e-59 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01449 K03955 - gmx:100305656 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01449 1 27342377 27344420 Lapu1g01449 1 27342377 27344420 ECH