Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01446 ATGCGGTTTTGCCCGTGCTTTGGATCGGAGGAGGTGAGGGCGATCGCGGATCGCGACCCGGTTCTGCTGGTTTCGGGTATGGGCGGCTCCATTGTGAATTCGAAGCCGAAGACATTGGGGTTCACCACTCGGGTTTGGGTCAGGCTCCTGCTCGCTGACATGGAGTTCAGGAAGAAGATTTGGTCTCTTTACAATCCCAAAACAGGCTACTGTGAAACGCTCGACAAGAAGTCTAAGCTTGTGGTCCCCGACGACGATCACGGTCTCTATGCGATCGATATTTTGGATCCGTCGTGGTTTACGAAGTGTGTACATTTGACAGAGGTGTATCATTTTCACGACATGATTGAGATGCTTGTTGGATGCGGCTACAAGAAGGGAACCACGCTGTTTGGGTTCGGATATGATTTCCGCCAAAGCAATAGGATTGAAAAGTCAATGGAAGGTTTTAAACATAAGTTGGAGACTGCTCACAAAGCTTCGGGTGGAAGAAAAGTCAATTTAGTTTCGCATTCCATGGGAGGAATTATGATCTCGTGTTTCATGTCGCTTCACAGAGATGTGTTTACGAAATATGTGAATAAGTGGATTTGCTTGGCTTGCCCTTTCCAAGGAGCCCCAGGGTGCATCAATGATTCTTTATTAACTGGATTGGAGTTTGTTGATGGCTTTCAAAGCTACTTTTTTGTGAAAAGGTGGACTATGCATCAATTGCTAGTGGAGTGTCCATCAGTCTATGAAATGTTGGCAAATCCATCCTATGAATGGAAAAAGCAGCCAGAAATTCTAGTTTGGCGAAAGCATACAAAGGACGGGGACAATAACAGCAATTTGGAATCTTATGGACCAATGCAGAGTATATCTTTATTCGAAGAAGCACTGAGGCATAATGAGCTAAGTTATAATGGGAAAACGATACCCCTGCCCTTTAACTTTGATATCCTTGACTGGGCTATTGAAACACGAAAACTTACCGCAAATGCTAAACTACCAGATGGAATCAGCTTCTATAACATCTACGGGACATCATTGGACACGCCTTTTGATGTTTGTTATGGATCGGAAAATTCTCCAATTGAGGACTTATCAGAAATTTGCCACACAATGCCGCAATATTCTTATGTAGATGGAGATGGAACAGTTCCTACTGAATCTGCGAAGGCTGATGGACTCAAAGCCACCGAAAGGGTGGGAGTTGCTGCTTCTCATCGTGGAATATTACGAGATGAAACAGTATTTCAACTTATTCAAAAATGGTTGGGTGTTGAGCCGATGGTTAGCATGCAATCTAAAACATCTAAAGTTGCAGATGCTGATCCAATCATGCCTATGGTTCTATAA 1341 0.4385 MRFCPCFGSEEVRAIADRDPVLLVSGMGGSIVNSKPKTLGFTTRVWVRLLLADMEFRKKIWSLYNPKTGYCETLDKKSKLVVPDDDHGLYAIDILDPSWFTKCVHLTEVYHFHDMIEMLVGCGYKKGTTLFGFGYDFRQSNRIEKSMEGFKHKLETAHKASGGRKVNLVSHSMGGIMISCFMSLHRDVFTKYVNKWICLACPFQGAPGCINDSLLTGLEFVDGFQSYFFVKRWTMHQLLVECPSVYEMLANPSYEWKKQPEILVWRKHTKDGDNNSNLESYGPMQSISLFEEALRHNELSYNGKTIPLPFNFDILDWAIETRKLTANAKLPDGISFYNIYGTSLDTPFDVCYGSENSPIEDLSEICHTMPQYSYVDGDGTVPTESAKADGLKATERVGVAASHRGILRDETVFQLIQKWLGVEPMVSMQSKTSKVADADPIMPMVL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01446 446 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 15 426 - -
Lapu1g01446 446 Pfam Lecithin:cholesterol acyltransferase 84 250 IPR003386 GO:0006629|GO:0008374
Lapu1g01446 446 Gene3D alpha/beta hydrolase 79 421 IPR029058 -
Lapu1g01446 446 SUPERFAMILY alpha/beta-Hydrolases 17 407 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01446 Lapu-Chr1 27314308 27324246 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01446 4 438 Acyl Lipid Metabolism Gene Families AT3G03310 67.574 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01446 K22389 - gmx:100797043 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01446 1 27314308 27324246 Lapu1g01446 1 27314308 27324246 ECH