Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01393 ATGGGTTGCACGGCCTCCAAGCTAGAAAACGAGGACACCGTGCGTCGGTGCAAGGACCGCCGCCGTCTCATGAAGGACGCCGTCTACGCGCGCCACCAGCTCGCTGCCGCTCACTCCGACTACTGCCGCTCCCTCCGCCTTACCGGCTCCGCCCTCTCCGCCTTTGCCGCCGGCGAACCCCTCTCTGTCTCCGACCACACCCCCGCCGTCTTCCTTAACAACTCCCAACAACCACCCCCACCCCCACCCATCCACCACAGTCGTCCACCCTCGCCACCTCGCCACCACCACCACTCTCCACCACCCTTCAACCCTTCCCCGCCTCCGAAACTCGCCCCCATCCAACCCCGTCGCCGCAAGCCGCCACCGCCGAAGCTCCCCCACATTCTCTCCGAGTCGAGCCCATCCTCCACGCCTCGAAGCCACGTGTCGAATTTTCCTTCGAACTTTTTCCCCACCGCGCATTCCACATACTCCTCCACCCCTTCCCAAACCTCCTCCGTTTGGAACTGGGAAAATTTCTACCCTCCTCCTCCTCCTCCGGCTTCCGATTACTTCCCCGAAGAACACCAACACCAACACCAACAAAAACTCTCACGGACTCAAACACACATACAAACACCTTCCCTTCACTCTCACAAAACTCAAACACCCTCTCATTACTCCCACAAAACCCAACCCACCAATCTCCAAATTCACGACTCCGACTCCGAGAGATCTGAATACGATTACTTCGACGGAAAACTCGAGACTCAAAAAACTTACTCCCATTCTCGCTCTCGCTCTCCCTCTCACACTCACTCTGATTCTCACTCTCATCACCATCTTCCCGAGGAGTATACTGAGACTGAGAGGGAAGAGGTTCAGTGCAGTGAGTGGGGGGATCATTACAGCACCACGAGTTCCTCCGATGACGATGATGATGGGGTGGAGGAGGATGTGGAGTCGCGGTCCGAGATCGGGACCCGGTCGAATTTCGGGTCCTCCATGCGGGCTGAATCGGTTGCCGCCGCCGCCGGCGCTAAAGGGTTCGACTCTGCCTCCTCCGTCGCGGAGATGAAGATGGTGGTAAGGCACAGGGACTTGAGGGAGATCGTCGAAGCTATTAAGGAGAATTTTGATAATGCAGCTTCTGCTGGAGATCAGGTTTCGGAGATGCTCGAGATCAGTAAGGCTCAGCTTGATCGCAGCTTCAAACAATTGAGGAAGACGGTGTATCACTCGAGTAGCATATTGAGCAACTTGAGCTCGAGTTGGACCTCGAAACCACCATTGGCGGTTAAGTACCGGCTGGACACCGGTTCACTGGATGAACCGGGCGGTTCAAAGAGTCTTTGCTCCACCATAGAGCGGCTTTTGGCGTGGGAGAAAAAGCTGTACGAGGAGGTTAAGGCTAGAGAAGGTGTTAAGATTGAACATGAAAAGAAATTGTCAGCTCTGCAGACTCAGGAATACAAAGGAGAGGATGAAGCTAAGATATTCAAAACCAAGACTTCCATAAATAGGCTGCAGTCACTGATAGTTGTTACATCTCAGGCTGTGTCTACCACCTCAACTGCCATTGTTGGCCTTAGGGACTCTGATCTTGTCCCTCAGCTTGTTGCTCTCATTCATGGATTTATGTACATGTGGAAAGCAATGCACAATTACCATGAAATTCAAAGCAACATAGTACAGCAAGTCCGTGGCCTTGTGAACAGATCTTCAAGAGGTGACTCCACTTCTGAACTGCACAGGCAGTATACTCGGGACCTTGAAGCGGCTGTGTCAACTTGGCACTCCAGTTTTTGTCGCCTTATAAAATTTCATCGGGACTTCATCCTCTCCTTGCATGGCTGGTTCAAGCTCAGCCTTCTTCCAGTCAACAATGATAACATCAACAACAGCAGGGACAACTCTGATACATACCACTTTTTTGATGAGTGGAAACTCGCACTTGACCGTGTTCCAGACACGGTTGCATCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAGACTGAAGAGCTCAAGATCAAGAAAAGAACTGAGACTGCATCCAAGGAACTTGAGAAAAAGGCTTCCTCTCTGAGAAACTTAGAGAGGAAGTTCTACAGCTCATATTCAATGGTAGGTATTAGTCTTCCCGATACAGCGCCTGACAATGGACAAGGTTTGGATGCACGTGATCCACTTGCTGAGAAAAAACTGGAACTGGCAACCTGCCAAAGGCGTGTTGAAGATGAAATGCTGAGGCATTCAAAAGCTGTGGAGGTAACAAGAGCCATGACCCTCAACAATTTGCAAACAGGTTTGCCTGGAGTGTTTCAGGCATTGACCAGTTTCTCTTCCTTGTTCACTGAGGCTCTTGAATCAGTGTGTACCCGTTCATATGCCATCAAGTAG 2403 0.5148 MGCTASKLENEDTVRRCKDRRRLMKDAVYARHQLAAAHSDYCRSLRLTGSALSAFAAGEPLSVSDHTPAVFLNNSQQPPPPPPIHHSRPPSPPRHHHHSPPPFNPSPPPKLAPIQPRRRKPPPPKLPHILSESSPSSTPRSHVSNFPSNFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPASDYFPEEHQHQHQQKLSRTQTHIQTPSLHSHKTQTPSHYSHKTQPTNLQIHDSDSERSEYDYFDGKLETQKTYSHSRSRSPSHTHSDSHSHHHLPEEYTETEREEVQCSEWGDHYSTTSSSDDDDDGVEEDVESRSEIGTRSNFGSSMRAESVAAAAGAKGFDSASSVAEMKMVVRHRDLREIVEAIKENFDNAASAGDQVSEMLEISKAQLDRSFKQLRKTVYHSSSILSNLSSSWTSKPPLAVKYRLDTGSLDEPGGSKSLCSTIERLLAWEKKLYEEVKAREGVKIEHEKKLSALQTQEYKGEDEAKIFKTKTSINRLQSLIVVTSQAVSTTSTAIVGLRDSDLVPQLVALIHGFMYMWKAMHNYHEIQSNIVQQVRGLVNRSSRGDSTSELHRQYTRDLEAAVSTWHSSFCRLIKFHRDFILSLHGWFKLSLLPVNNDNINNSRDNSDTYHFFDEWKLALDRVPDTVASEAIKSFINVVHVISSKQTEELKIKKRTETASKELEKKASSLRNLERKFYSSYSMVGISLPDTAPDNGQGLDARDPLAEKKLELATCQRRVEDEMLRHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALESVCTRSYAIK* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01393 800 MobiDBLite consensus disorder prediction 96 120 - -
Lapu1g01393 800 Coils Coil 679 702 - -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 198 233 - -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 130 145 - -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 253 329 - -
Lapu1g01393 800 Pfam Protein of unknown function (DUF632) 362 666 IPR006867 -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 262 292 - -
Lapu1g01393 800 PANTHER UNCHARACTERIZED 1 794 - -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 179 241 - -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 69 145 - -
Lapu1g01393 800 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lapu1g01393 800 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01393 Lapu-Chr1 26736901 26742776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01393 1 98 Acyl Lipid Metabolism Gene Families AT2G27090 31.429 4.37e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01393 - - gmx:778134 1231.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01393 1 26736901 26742776 Lapu1g01393 1 26736901 26742776 ECH
Lapu10g00802 10 9787524 9793588 Lapu1g01393 1 26736901 26742776 PCT